Cluster: CGMR048616_CGC60
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR048616
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_105040 | k141_105040_2 | 905 | 2638 | - | 2.A.36.6.11 |
| peptidase | k141_105040 | k141_105040_3 | 2736 | 3650 | - | S66.002 |
| CAZyme | k141_105040 | k141_105040_4 | 3757 | 4368 | + | GH23 |
| pfam | k141_105040 | k141_105040_5 | 4406 | 5137 | - | PilZ | PilZN |
| TC | k141_105040 | k141_105040_6 | 5346 | 5600 | + | 1.E.43.1.1 |
| TC | k141_105040 | k141_105040_7 | 5713 | 7815 | + | 1.B.14.1.2 |
| CAZyme | k141_105040 | k141_105040_8 | 7898 | 9583 | - | GH37 |
| TC | k141_105040 | k141_105040_9 | 10004 | 11344 | + | 1.B.15.1.1 |
| TF | k141_105040 | k141_105040_10 | 11360 | 12316 | - | HTH_AraC | HTH_AraC |
| TC | k141_105040 | k141_105040_11 | 12432 | 13619 | + | 2.A.1.2.26 |
Gene ID: k141_105040_2
Type: TC
Location: 905 - 2638 (-)
Type: TC
Location: 905 - 2638 (-)
Gene ID: k141_105040_3
Type: peptidase
Location: 2736 - 3650 (-)
Type: peptidase
Location: 2736 - 3650 (-)
Gene ID: k141_105040_4
Type: CAZyme
Location: 3757 - 4368 (+)
Type: CAZyme
Location: 3757 - 4368 (+)
Gene ID: k141_105040_5
Type: pfam
Location: 4406 - 5137 (-)
Type: pfam
Location: 4406 - 5137 (-)
Gene ID: k141_105040_6
Type: TC
Location: 5346 - 5600 (+)
Type: TC
Location: 5346 - 5600 (+)
Gene ID: k141_105040_7
Type: TC
Location: 5713 - 7815 (+)
Type: TC
Location: 5713 - 7815 (+)
Gene ID: k141_105040_8
Type: CAZyme
Location: 7898 - 9583 (-)
Type: CAZyme
Location: 7898 - 9583 (-)
Gene ID: k141_105040_9
Type: TC
Location: 10004 - 11344 (+)
Type: TC
Location: 10004 - 11344 (+)
Gene ID: k141_105040_10
Type: TF
Location: 11360 - 12316 (-)
Type: TF
Location: 11360 - 12316 (-)
Gene ID: k141_105040_11
Type: TC
Location: 12432 - 13619 (+)
Type: TC
Location: 12432 - 13619 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter kobei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_105040_3 | vegetarian > omnivore | 2.31096 | 0.03330 |
| k141_105040_3 | vegetarian > vegan | 1.62879 | 0.04949 |
| k141_105040_5 | vegetarian > omnivore | 1.54690 | 0.03330 |
| k141_105040_5 | vegetarian > vegan | 1.81648 | 0.04949 |
| k141_105040_8 | vegetarian > omnivore | 1.25604 | 0.02624 |