dbCAN Logo

Cluster: CGMR048616_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_120885 k141_120885_4 3020 4015 + 9.B.97.1.1
pfam k141_120885 k141_120885_5 4070 5524 - FGGY_N | FGGY_C
NULL(UNKNOWN) k141_120885 k141_120885_6 5586 6971 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_120885 k141_120885_7 7279 8271 + 3.A.1.2.4
TC k141_120885 k141_120885_8 8344 9885 + 3.A.1.2.4
TC k141_120885 k141_120885_9 9863 11044 + 3.A.1.2.4
TF k141_120885 k141_120885_10 11078 12256 + HTH_AraC | HTH_AraC
CAZyme k141_120885 k141_120885_11 12295 13119 - GH73
CAZyme k141_120885 k141_120885_12 13434 15464 + GH13_19
STP k141_120885 k141_120885_13 15708 16964 + Aminotran_1_2
TF k141_120885 k141_120885_14 17021 17830 - HTH_AraC
TC k141_120885 k141_120885_15 18056 19456 + 2.A.2.3.6
CAZyme k141_120885 k141_120885_16 19467 21416 + GH127
TC k141_120885 k141_120885_17 21491 22231 - 9.B.99.1.1
Gene ID: k141_120885_4
Type: TC
Location: 3020 - 4015 (+)
Gene ID: k141_120885_5
Type: pfam
Location: 4070 - 5524 (-)
Gene ID: k141_120885_6
Type:
Location: 5586 - 6971 (-)
Gene ID: k141_120885_7
Type: TC
Location: 7279 - 8271 (+)
Gene ID: k141_120885_8
Type: TC
Location: 8344 - 9885 (+)
Gene ID: k141_120885_9
Type: TC
Location: 9863 - 11044 (+)
Gene ID: k141_120885_10
Type: TF
Location: 11078 - 12256 (+)
Gene ID: k141_120885_11
Type: CAZyme
Location: 12295 - 13119 (-)
Gene ID: k141_120885_12
Type: CAZyme
Location: 13434 - 15464 (+)
Gene ID: k141_120885_13
Type: STP
Location: 15708 - 16964 (+)
Gene ID: k141_120885_14
Type: TF
Location: 17021 - 17830 (-)
Gene ID: k141_120885_15
Type: TC
Location: 18056 - 19456 (+)
Gene ID: k141_120885_16
Type: CAZyme
Location: 19467 - 21416 (+)
Gene ID: k141_120885_17
Type: TC
Location: 21491 - 22231 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_120885_5 vegetarian > omnivore 1.26822 0.03330
k141_120885_5 vegetarian > vegan 1.14583 0.04949

🧭 Explore Read Mapping of CGC

← Back to Cluster List