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Cluster: CGMR048616_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_161073 k141_161073_116 123368 124978 - 2.A.1.42.2
pfam k141_161073 k141_161073_117 124988 126163 - Chorismate_bind
TC k141_161073 k141_161073_118 126351 127310 + 3.A.1.14.2
TC k141_161073 k141_161073_119 127394 128629 - 2.A.1.38.1
TC k141_161073 k141_161073_120 128738 129742 + 3.A.1.14.2
TC k141_161073 k141_161073_121 129739 130731 + 3.A.1.14.2
TC k141_161073 k141_161073_122 130728 131522 + 3.A.1.14.2
TC k141_161073 k141_161073_123 131605 135462 - 4.C.1.1.6
pfam k141_161073 k141_161073_124 135459 135671 - MbtH
peptidase k141_161073 k141_161073_125 135682 136878 - S09.UNW
TC k141_161073 k141_161073_126 137024 139264 + 1.B.14.1.22
pfam k141_161073 k141_161073_127 139324 139998 + ACPS | 4PPT_N
TC k141_161073 k141_161073_128 139952 140791 - 3.A.1.15.7
TC k141_161073 k141_161073_129 140788 141645 - 3.A.1.15.7
TC k141_161073 k141_161073_130 141642 142448 - 3.A.1.15.7
TC k141_161073 k141_161073_131 142451 143362 - 3.A.1.15.7
TF k141_161073 k141_161073_132 143529 143813 - HTH_3
pfam k141_161073 k141_161073_133 143810 144202 - RelE
TC k141_161073 k141_161073_134 144339 146372 - 2.A.15.1.4
STP k141_161073 k141_161073_135 146501 147088 + TetR_N
sulfatase k141_161073 k141_161073_136 147102 148574 + S1_6
CAZyme k141_161073 k141_161073_137 148588 150252 + AA3_2
Gene ID: k141_161073_116
Type: TC
Location: 123368 - 124978 (-)
Gene ID: k141_161073_117
Type: pfam
Location: 124988 - 126163 (-)
Gene ID: k141_161073_118
Type: TC
Location: 126351 - 127310 (+)
Gene ID: k141_161073_119
Type: TC
Location: 127394 - 128629 (-)
Gene ID: k141_161073_120
Type: TC
Location: 128738 - 129742 (+)
Gene ID: k141_161073_121
Type: TC
Location: 129739 - 130731 (+)
Gene ID: k141_161073_122
Type: TC
Location: 130728 - 131522 (+)
Gene ID: k141_161073_123
Type: TC
Location: 131605 - 135462 (-)
Gene ID: k141_161073_124
Type: pfam
Location: 135459 - 135671 (-)
Gene ID: k141_161073_125
Type: peptidase
Location: 135682 - 136878 (-)
Gene ID: k141_161073_126
Type: TC
Location: 137024 - 139264 (+)
Gene ID: k141_161073_127
Type: pfam
Location: 139324 - 139998 (+)
Gene ID: k141_161073_128
Type: TC
Location: 139952 - 140791 (-)
Gene ID: k141_161073_129
Type: TC
Location: 140788 - 141645 (-)
Gene ID: k141_161073_130
Type: TC
Location: 141642 - 142448 (-)
Gene ID: k141_161073_131
Type: TC
Location: 142451 - 143362 (-)
Gene ID: k141_161073_132
Type: TF
Location: 143529 - 143813 (-)
Gene ID: k141_161073_133
Type: pfam
Location: 143810 - 144202 (-)
Gene ID: k141_161073_134
Type: TC
Location: 144339 - 146372 (-)
Gene ID: k141_161073_135
Type: STP
Location: 146501 - 147088 (+)
Gene ID: k141_161073_136
Type: sulfatase
Location: 147102 - 148574 (+)
Gene ID: k141_161073_137
Type: CAZyme
Location: 148588 - 150252 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_161073_122 vegetarian > omnivore 1.48235 0.00978
k141_161073_125 vegetarian > omnivore 1.24216 0.03330
k141_161073_125 vegetarian > vegan 1.00918 0.04949
k141_161073_127 vegetarian > omnivore 1.09661 0.03330
k141_161073_127 vegetarian > vegan 1.41429 0.04949
k141_161073_128 vegetarian > vegan 1.24931 0.04949
k141_161073_129 vegetarian > vegan 1.27961 0.04949
k141_161073_130 vegetarian > omnivore 1.05938 0.03330

🧭 Explore Read Mapping of CGC

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