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Cluster: CGMR048616_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_161073 k141_161073_1 1 570 - 2.C.1.2.1
TC k141_161073 k141_161073_2 599 1027 - 1.A.30.2.2
TC k141_161073 k141_161073_3 1031 1723 - 1.A.30.2.2
pfam k141_161073 k141_161073_4 1720 2124 - 4HBT | 4HBT_2
TC k141_161073 k141_161073_5 2273 2563 - 8.A.79.1.1
TC k141_161073 k141_161073_6 2563 2676 - 9.B.85.1.1
TC k141_161073 k141_161073_7 2691 3830 - 3.D.4.3.2
TC k141_161073 k141_161073_8 3846 5414 - 3.D.4.3.2
CAZyme k141_161073 k141_161073_9 6086 8716 - GH38
TC k141_161073 k141_161073_10 8740 10656 - 4.A.2.1.3
Gene ID: k141_161073_1
Type: TC
Location: 1 - 570 (-)
Gene ID: k141_161073_2
Type: TC
Location: 599 - 1027 (-)
Gene ID: k141_161073_3
Type: TC
Location: 1031 - 1723 (-)
Gene ID: k141_161073_4
Type: pfam
Location: 1720 - 2124 (-)
Gene ID: k141_161073_5
Type: TC
Location: 2273 - 2563 (-)
Gene ID: k141_161073_6
Type: TC
Location: 2563 - 2676 (-)
Gene ID: k141_161073_7
Type: TC
Location: 2691 - 3830 (-)
Gene ID: k141_161073_8
Type: TC
Location: 3846 - 5414 (-)
Gene ID: k141_161073_9
Type: CAZyme
Location: 6086 - 8716 (-)
Gene ID: k141_161073_10
Type: TC
Location: 8740 - 10656 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_161073_9 vegetarian > omnivore 1.47895 0.03330
k141_161073_10 vegetarian > omnivore 2.58331 0.00918
k141_161073_10 vegetarian > vegan 1.30044 0.04449

🧭 Explore Read Mapping of CGC

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