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Cluster: CGMR048616_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_157542 k141_157542_73 83544 84728 + GH179
pfam k141_157542 k141_157542_74 84725 85792 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
pfam k141_157542 k141_157542_75 85805 86824 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
TC k141_157542 k141_157542_76 86904 88451 + 2.A.2.5.2
TC k141_157542 k141_157542_77 88647 89984 + 9.A.40.2.2
Gene ID: k141_157542_73
Type: CAZyme
Location: 83544 - 84728 (+)
Gene ID: k141_157542_74
Type: pfam
Location: 84725 - 85792 (+)
Gene ID: k141_157542_75
Type: pfam
Location: 85805 - 86824 (+)
Gene ID: k141_157542_76
Type: TC
Location: 86904 - 88451 (+)
Gene ID: k141_157542_77
Type: TC
Location: 88647 - 89984 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_157542_73 vegetarian > vegan 2.40202 0.04949

🧭 Explore Read Mapping of CGC

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