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Cluster: CGMR048616_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_157542 k141_157542_30 31090 32541 + AA10 | CBM73
CAZyme k141_157542 k141_157542_31 32627 35011 - GH20
TC k141_157542 k141_157542_32 35211 37919 - 3.A.3.4.1
TF k141_157542 k141_157542_33 38309 39256 + LacI
TC k141_157542 k141_157542_34 39384 40802 + 4.A.1.2.4
CAZyme k141_157542 k141_157542_35 40854 42509 + GH13_29
pfam k141_157542 k141_157542_36 42647 43393 + KdgM
TF k141_157542 k141_157542_37 43402 44061 - HTH_6
TC k141_157542 k141_157542_38 44235 45644 + 4.A.2.1.11
CAZyme k141_157542 k141_157542_39 45655 48252 + GH38
TC k141_157542 k141_157542_40 48254 48826 + 4.A.2.1.3
Gene ID: k141_157542_30
Type: CAZyme
Location: 31090 - 32541 (+)
Gene ID: k141_157542_31
Type: CAZyme
Location: 32627 - 35011 (-)
Gene ID: k141_157542_32
Type: TC
Location: 35211 - 37919 (-)
Gene ID: k141_157542_33
Type: TF
Location: 38309 - 39256 (+)
Gene ID: k141_157542_34
Type: TC
Location: 39384 - 40802 (+)
Gene ID: k141_157542_35
Type: CAZyme
Location: 40854 - 42509 (+)
Gene ID: k141_157542_36
Type: pfam
Location: 42647 - 43393 (+)
Gene ID: k141_157542_37
Type: TF
Location: 43402 - 44061 (-)
Gene ID: k141_157542_38
Type: TC
Location: 44235 - 45644 (+)
Gene ID: k141_157542_39
Type: CAZyme
Location: 45655 - 48252 (+)
Gene ID: k141_157542_40
Type: TC
Location: 48254 - 48826 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_157542_33 vegetarian > omnivore 1.14256 0.03330

🧭 Explore Read Mapping of CGC

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