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Cluster: CGMR048616_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_94017 k141_94017_1 3 836 - 3.A.1.14.3
TC k141_94017 k141_94017_2 833 1723 - 3.A.1.14.3
TC k141_94017 k141_94017_3 1723 2520 - 3.A.1.14.3
TC k141_94017 k141_94017_4 2571 4781 - 1.B.14.1.2
pfam k141_94017 k141_94017_5 4987 5991 - Fimbrial
TC k141_94017 k141_94017_6 6005 8482 - 1.B.11.3.6
pfam k141_94017 k141_94017_7 8503 9216 - PapD_N | PapD_C
pfam k141_94017 k141_94017_8 9259 9831 - Fimbrial
CAZyme k141_94017 k141_94017_9 10176 12701 - GT51
Gene ID: k141_94017_1
Type: TC
Location: 3 - 836 (-)
Gene ID: k141_94017_2
Type: TC
Location: 833 - 1723 (-)
Gene ID: k141_94017_3
Type: TC
Location: 1723 - 2520 (-)
Gene ID: k141_94017_4
Type: TC
Location: 2571 - 4781 (-)
Gene ID: k141_94017_5
Type: pfam
Location: 4987 - 5991 (-)
Gene ID: k141_94017_6
Type: TC
Location: 6005 - 8482 (-)
Gene ID: k141_94017_7
Type: pfam
Location: 8503 - 9216 (-)
Gene ID: k141_94017_8
Type: pfam
Location: 9259 - 9831 (-)
Gene ID: k141_94017_9
Type: CAZyme
Location: 10176 - 12701 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_94017_2 vegetarian > omnivore 1.62046 0.03201

🧭 Explore Read Mapping of CGC

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