Cluster: CGMR048616_CGC37
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR048616
- CGC Family ID: CGCFAM_00236
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_63752 | k141_63752_59 | 62933 | 63949 | + | 3.A.1.10.1 |
| TC | k141_63752 | k141_63752_60 | 63974 | 65548 | + | 3.A.1.10.1 |
| TC | k141_63752 | k141_63752_61 | 65550 | 66572 | + | 3.A.1.10.1 |
| TC | k141_63752 | k141_63752_62 | 66750 | 68933 | + | 1.B.14.1.15 |
| pfam | k141_63752 | k141_63752_63 | 69061 | 71034 | + | PhoX |
| TC | k141_63752 | k141_63752_64 | 71137 | 72525 | + | 2.A.3.1.1 |
| TC | k141_63752 | k141_63752_65 | 72759 | 73994 | + | 2.A.1.10.4 |
| pfam | k141_63752 | k141_63752_66 | 74010 | 75035 | + | AP_endonuc_2 |
| CAZyme | k141_63752 | k141_63752_67 | 75028 | 76170 | + | GH109 |
| TF | k141_63752 | k141_63752_68 | 76246 | 77217 | + | LacI |
| TC | k141_63752 | k141_63752_69 | 77218 | 78462 | - | 1.A.23.4.5 |
| TC | k141_63752 | k141_63752_70 | 78529 | 79965 | - | 2.A.1.3.38 |
Gene ID: k141_63752_59
Type: TC
Location: 62933 - 63949 (+)
Type: TC
Location: 62933 - 63949 (+)
Gene ID: k141_63752_60
Type: TC
Location: 63974 - 65548 (+)
Type: TC
Location: 63974 - 65548 (+)
Gene ID: k141_63752_61
Type: TC
Location: 65550 - 66572 (+)
Type: TC
Location: 65550 - 66572 (+)
Gene ID: k141_63752_62
Type: TC
Location: 66750 - 68933 (+)
Type: TC
Location: 66750 - 68933 (+)
Gene ID: k141_63752_63
Type: pfam
Location: 69061 - 71034 (+)
Type: pfam
Location: 69061 - 71034 (+)
Gene ID: k141_63752_64
Type: TC
Location: 71137 - 72525 (+)
Type: TC
Location: 71137 - 72525 (+)
Gene ID: k141_63752_65
Type: TC
Location: 72759 - 73994 (+)
Type: TC
Location: 72759 - 73994 (+)
Gene ID: k141_63752_66
Type: pfam
Location: 74010 - 75035 (+)
Type: pfam
Location: 74010 - 75035 (+)
Gene ID: k141_63752_67
Type: CAZyme
Location: 75028 - 76170 (+)
Type: CAZyme
Location: 75028 - 76170 (+)
Gene ID: k141_63752_68
Type: TF
Location: 76246 - 77217 (+)
Type: TF
Location: 76246 - 77217 (+)
Gene ID: k141_63752_69
Type: TC
Location: 77218 - 78462 (-)
Type: TC
Location: 77218 - 78462 (-)
Gene ID: k141_63752_70
Type: TC
Location: 78529 - 79965 (-)
Type: TC
Location: 78529 - 79965 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter kobei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_63752_62 | vegetarian > omnivore | 2.41009 | 0.00978 |
| k141_63752_63 | vegetarian > omnivore | 1.63971 | 0.03330 |
| k141_63752_63 | vegetarian > vegan | 1.43377 | 0.04949 |
| k141_63752_67 | vegetarian > omnivore | 1.02066 | 0.03330 |
| k141_63752_68 | vegan > omnivore | 1.67386 | 0.03488 |
| k141_63752_68 | vegetarian > omnivore | 2.34580 | 0.01754 |
| k141_63752_69 | vegetarian > omnivore | 1.16378 | 0.01818 |
| k141_63752_70 | vegetarian > omnivore | 2.53535 | 0.03330 |