Cluster: CGMR048616_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: galactan
- Genome ID: CGMR048616
- CGC Family ID: CGCFAM_00933
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_150603 | k141_150603_54 | 59483 | 60760 | - | 2.A.1.5.4 |
| CAZyme | k141_150603 | k141_150603_55 | 60805 | 62928 | - | GH36 |
| TF | k141_150603 | k141_150603_56 | 63032 | 64027 | - | LacI |
| TF | k141_150603 | k141_150603_57 | 64045 | 64593 | - | HTH_3 |
| TC | k141_150603 | k141_150603_58 | 64698 | 65357 | + | 2.A.78.2.3 |
| TC | k141_150603 | k141_150603_59 | 65357 | 65680 | + | 2.A.78.2.3 |
Gene ID: k141_150603_54
Type: TC
Location: 59483 - 60760 (-)
Type: TC
Location: 59483 - 60760 (-)
Gene ID: k141_150603_55
Type: CAZyme
Location: 60805 - 62928 (-)
Type: CAZyme
Location: 60805 - 62928 (-)
Gene ID: k141_150603_56
Type: TF
Location: 63032 - 64027 (-)
Type: TF
Location: 63032 - 64027 (-)
Gene ID: k141_150603_57
Type: TF
Location: 64045 - 64593 (-)
Type: TF
Location: 64045 - 64593 (-)
Gene ID: k141_150603_58
Type: TC
Location: 64698 - 65357 (+)
Type: TC
Location: 64698 - 65357 (+)
Gene ID: k141_150603_59
Type: TC
Location: 65357 - 65680 (+)
Type: TC
Location: 65357 - 65680 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter kobei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_150603_54 | vegetarian > omnivore | 1.42730 | 0.03330 |
| k141_150603_54 | vegetarian > vegan | 1.03763 | 0.04949 |
| k141_150603_56 | vegetarian > omnivore | 1.02209 | 0.03330 |
| k141_150603_56 | vegetarian > vegan | 1.83133 | 0.03557 |
| k141_150603_59 | vegetarian > omnivore | 1.01433 | 0.03330 |