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Cluster: CGMR048616_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_43215 k141_43215_121 125067 126278 + 2.A.42.1.1
pfam k141_43215 k141_43215_122 126312 126980 - SEC-C | UPF0149
TC k141_43215 k141_43215_123 127394 128515 + 3.A.1.4.3
TC k141_43215 k141_43215_124 128615 129529 + 3.A.1.4.8
TC k141_43215 k141_43215_125 129541 130815 + 3.A.1.4.8
TC k141_43215 k141_43215_126 130812 131687 + 3.A.1.4.8
TC k141_43215 k141_43215_127 131684 132400 + 3.A.1.4.1
pfam k141_43215 k141_43215_128 132643 133104 + tRNA_anti-like
NULL(UNKNOWN) k141_43215 k141_43215_129 133696 134055 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_43215 k141_43215_130 134052 134591 - GH24
TC k141_43215 k141_43215_131 134572 134802 - 1.E.1.1.2
pfam k141_43215 k141_43215_132 134952 135314 + GtrA_DPMS_TM
CAZyme k141_43215 k141_43215_133 135311 136240 + GT2
Gene ID: k141_43215_121
Type: TC
Location: 125067 - 126278 (+)
Gene ID: k141_43215_122
Type: pfam
Location: 126312 - 126980 (-)
Gene ID: k141_43215_123
Type: TC
Location: 127394 - 128515 (+)
Gene ID: k141_43215_124
Type: TC
Location: 128615 - 129529 (+)
Gene ID: k141_43215_125
Type: TC
Location: 129541 - 130815 (+)
Gene ID: k141_43215_126
Type: TC
Location: 130812 - 131687 (+)
Gene ID: k141_43215_127
Type: TC
Location: 131684 - 132400 (+)
Gene ID: k141_43215_128
Type: pfam
Location: 132643 - 133104 (+)
Gene ID: k141_43215_129
Type:
Location: 133696 - 134055 (-)
Gene ID: k141_43215_130
Type: CAZyme
Location: 134052 - 134591 (-)
Gene ID: k141_43215_131
Type: TC
Location: 134572 - 134802 (-)
Gene ID: k141_43215_132
Type: pfam
Location: 134952 - 135314 (+)
Gene ID: k141_43215_133
Type: CAZyme
Location: 135311 - 136240 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_43215_122 vegetarian > omnivore 1.42498 0.03034
k141_43215_123 vegetarian > omnivore 1.42162 0.03330
k141_43215_127 vegetarian > omnivore 1.58132 0.03330

🧭 Explore Read Mapping of CGC

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