Cluster: CGMR048616_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR048616
- CGC Family ID: CGCFAM_01019
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_115756 | k141_115756_84 | 95433 | 96062 | - | 5.A.3.3.2 |
| TC | k141_115756 | k141_115756_85 | 96059 | 97696 | - | 5.A.3.3.2 |
| TC | k141_115756 | k141_115756_86 | 97693 | 98436 | - | 5.A.3.3.2 |
| CAZyme | k141_115756 | k141_115756_87 | 98525 | 100852 | - | GT51 |
| peptidase | k141_115756 | k141_115756_88 | 100854 | 105806 | - | I39.008 |
| TC | k141_115756 | k141_115756_89 | 106094 | 107638 | + | 4.A.1.1.16 |
| CAZyme | k141_115756 | k141_115756_90 | 107651 | 109018 | + | GH4 |
Gene ID: k141_115756_84
Type: TC
Location: 95433 - 96062 (-)
Type: TC
Location: 95433 - 96062 (-)
Gene ID: k141_115756_85
Type: TC
Location: 96059 - 97696 (-)
Type: TC
Location: 96059 - 97696 (-)
Gene ID: k141_115756_86
Type: TC
Location: 97693 - 98436 (-)
Type: TC
Location: 97693 - 98436 (-)
Gene ID: k141_115756_87
Type: CAZyme
Location: 98525 - 100852 (-)
Type: CAZyme
Location: 98525 - 100852 (-)
Gene ID: k141_115756_88
Type: peptidase
Location: 100854 - 105806 (-)
Type: peptidase
Location: 100854 - 105806 (-)
Gene ID: k141_115756_89
Type: TC
Location: 106094 - 107638 (+)
Type: TC
Location: 106094 - 107638 (+)
Gene ID: k141_115756_90
Type: CAZyme
Location: 107651 - 109018 (+)
Type: CAZyme
Location: 107651 - 109018 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter kobei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_115756_84 | vegetarian > omnivore | 1.35575 | 0.03330 |
| k141_115756_85 | vegetarian > omnivore | 1.24773 | 0.03330 |
| k141_115756_86 | vegetarian > vegan | 1.41430 | 0.04949 |
| k141_115756_87 | vegetarian > omnivore | 1.32881 | 0.03330 |
| k141_115756_89 | vegetarian > omnivore | 1.81963 | 0.03330 |
| k141_115756_89 | vegetarian > vegan | 1.63804 | 0.03557 |
| k141_115756_90 | vegetarian > omnivore | 1.22233 | 0.03330 |