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Cluster: CGMR048616_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_31028 k141_31028_129 136517 138304 + GH13_10
CAZyme k141_31028 k141_31028_130 138301 140769 + GH13_26
CAZyme k141_31028 k141_31028_131 140785 142860 + CBM48 | GH13_11
TF k141_31028 k141_31028_132 142863 143408 - 0042156
pfam k141_31028 k141_31028_133 143607 144329 + DUF969
TC k141_31028 k141_31028_134 144326 145312 + 9.B.211.1.1
pfam k141_31028 k141_31028_135 145322 146317 + DUF2891
TC k141_31028 k141_31028_136 146395 147813 - 2.A.1.3.17
TF k141_31028 k141_31028_137 147931 148836 + HTH_1
TC k141_31028 k141_31028_138 148841 150295 - 2.A.21.9.1
TF k141_31028 k141_31028_139 150285 150998 - Trans_reg_C
TC k141_31028 k141_31028_140 151131 152516 + 1.B.17.3.4
TC k141_31028 k141_31028_141 152545 152886 + 2.A.6.1.4
TC k141_31028 k141_31028_142 152898 154148 + 2.A.6.1.4
TC k141_31028 k141_31028_143 154156 157299 + 2.A.6.1.3
Gene ID: k141_31028_129
Type: CAZyme
Location: 136517 - 138304 (+)
Gene ID: k141_31028_130
Type: CAZyme
Location: 138301 - 140769 (+)
Gene ID: k141_31028_131
Type: CAZyme
Location: 140785 - 142860 (+)
Gene ID: k141_31028_132
Type: TF
Location: 142863 - 143408 (-)
Gene ID: k141_31028_133
Type: pfam
Location: 143607 - 144329 (+)
Gene ID: k141_31028_134
Type: TC
Location: 144326 - 145312 (+)
Gene ID: k141_31028_135
Type: pfam
Location: 145322 - 146317 (+)
Gene ID: k141_31028_136
Type: TC
Location: 146395 - 147813 (-)
Gene ID: k141_31028_137
Type: TF
Location: 147931 - 148836 (+)
Gene ID: k141_31028_138
Type: TC
Location: 148841 - 150295 (-)
Gene ID: k141_31028_139
Type: TF
Location: 150285 - 150998 (-)
Gene ID: k141_31028_140
Type: TC
Location: 151131 - 152516 (+)
Gene ID: k141_31028_141
Type: TC
Location: 152545 - 152886 (+)
Gene ID: k141_31028_142
Type: TC
Location: 152898 - 154148 (+)
Gene ID: k141_31028_143
Type: TC
Location: 154156 - 157299 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_31028_130 vegetarian > omnivore 1.62067 0.03330
k141_31028_130 vegetarian > vegan 1.31373 0.04949
k141_31028_131 vegetarian > omnivore 2.33593 0.03330
k141_31028_131 vegetarian > vegan 2.22826 0.04949
k141_31028_132 vegetarian > omnivore 1.39819 0.03330
k141_31028_135 vegetarian > omnivore 1.39392 0.03034
k141_31028_135 vegetarian > vegan 3.13032 0.01479

🧭 Explore Read Mapping of CGC

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