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Cluster: CGMR048616_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_68267 k141_68267_14 12798 14213 - 2.A.1.3.26
TC k141_68267 k141_68267_15 14214 17291 - 2.A.6.2.12
TC k141_68267 k141_68267_16 17292 20414 - 2.A.6.2.12
TC k141_68267 k141_68267_17 20414 21616 - 8.A.1.6.2
pfam k141_68267 k141_68267_18 21824 23176 - HSP70 | HSP70
STP k141_68267 k141_68267_19 23307 24179 + AlkA_N | HhH-GPD
TC k141_68267 k141_68267_20 24144 27473 - 9.B.34.1.1
pfam k141_68267 k141_68267_21 27817 28458 + PRK | AAA_18
pfam k141_68267 k141_68267_22 28550 29131 + DCD_N | DCD
TC k141_68267 k141_68267_23 29154 31004 + 9.B.22.2.1
TC k141_68267 k141_68267_24 31065 32648 - 2.A.109.2.3
TC k141_68267 k141_68267_25 33342 34481 + 1.B.18.3.1
pfam k141_68267 k141_68267_26 34488 34931 + LMWPc
TC k141_68267 k141_68267_27 34934 37096 + 8.A.3.3.2
CAZyme k141_68267 k141_68267_28 37223 38065 + GT2
pfam k141_68267 k141_68267_29 38065 38556 + Hexapep
CAZyme k141_68267 k141_68267_30 38553 39770 + GT4
NULL(UNKNOWN) k141_68267 k141_68267_31 39745 40965 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_68267 k141_68267_32 40982 41728 + GT2
Gene ID: k141_68267_14
Type: TC
Location: 12798 - 14213 (-)
Gene ID: k141_68267_15
Type: TC
Location: 14214 - 17291 (-)
Gene ID: k141_68267_16
Type: TC
Location: 17292 - 20414 (-)
Gene ID: k141_68267_17
Type: TC
Location: 20414 - 21616 (-)
Gene ID: k141_68267_18
Type: pfam
Location: 21824 - 23176 (-)
Gene ID: k141_68267_19
Type: STP
Location: 23307 - 24179 (+)
Gene ID: k141_68267_20
Type: TC
Location: 24144 - 27473 (-)
Gene ID: k141_68267_21
Type: pfam
Location: 27817 - 28458 (+)
Gene ID: k141_68267_22
Type: pfam
Location: 28550 - 29131 (+)
Gene ID: k141_68267_23
Type: TC
Location: 29154 - 31004 (+)
Gene ID: k141_68267_24
Type: TC
Location: 31065 - 32648 (-)
Gene ID: k141_68267_25
Type: TC
Location: 33342 - 34481 (+)
Gene ID: k141_68267_26
Type: pfam
Location: 34488 - 34931 (+)
Gene ID: k141_68267_27
Type: TC
Location: 34934 - 37096 (+)
Gene ID: k141_68267_28
Type: CAZyme
Location: 37223 - 38065 (+)
Gene ID: k141_68267_29
Type: pfam
Location: 38065 - 38556 (+)
Gene ID: k141_68267_30
Type: CAZyme
Location: 38553 - 39770 (+)
Gene ID: k141_68267_31
Type:
Location: 39745 - 40965 (+)
Gene ID: k141_68267_32
Type: CAZyme
Location: 40982 - 41728 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_68267_32 vegetarian > omnivore 2.90326 0.03330

🧭 Explore Read Mapping of CGC

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