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Cluster: CGMR048616_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_157136 k141_157136_20 16774 17067 - 3.A.1.27.3
TC k141_157136 k141_157136_21 17067 17702 - 3.A.1.27.3
TC k141_157136 k141_157136_22 17720 18268 - 3.A.1.27.3
TC k141_157136 k141_157136_23 18273 19055 - 3.A.1.27.3
TC k141_157136 k141_157136_24 19063 19875 - 3.A.1.27.3
TC k141_157136 k141_157136_25 20103 21080 + 2.A.19.5.1
STP k141_157136 k141_157136_26 21094 22080 + CBS | CBS | SIS
pfam k141_157136 k141_157136_27 22095 22661 + Hydrolase_3
TC k141_157136 k141_157136_28 22658 23233 + 1.B.42.1.2
TC k141_157136 k141_157136_29 23202 23756 + 1.B.42.1.2
TC k141_157136 k141_157136_30 23763 24488 + 1.B.42.1.2
pfam k141_157136 k141_157136_31 24536 25969 + Sigma54_AID | Sigma54_DBD | Sigma54_CBD
pfam k141_157136 k141_157136_32 25992 26279 + Ribosomal_S30AE
TC k141_157136 k141_157136_33 26362 26853 + 4.A.2.1.4
pfam k141_157136 k141_157136_34 26899 27753 + RapZ-like_N | PapZ_C
TC k141_157136 k141_157136_35 27750 28022 + 8.A.8.1.5
CAZyme k141_157136 k141_157136_36 28061 28786 - GT51
peptidase k141_157136 k141_157136_37 28783 29436 - C56.975
STP k141_157136 k141_157136_38 29669 32002 - HATPase_c | HisKA | PAS | Response_reg
TC k141_157136 k141_157136_39 32138 33220 - 1.B.42.1.2
TC k141_157136 k141_157136_40 33220 34299 - 1.B.42.1.2
Gene ID: k141_157136_20
Type: TC
Location: 16774 - 17067 (-)
Gene ID: k141_157136_21
Type: TC
Location: 17067 - 17702 (-)
Gene ID: k141_157136_22
Type: TC
Location: 17720 - 18268 (-)
Gene ID: k141_157136_23
Type: TC
Location: 18273 - 19055 (-)
Gene ID: k141_157136_24
Type: TC
Location: 19063 - 19875 (-)
Gene ID: k141_157136_25
Type: TC
Location: 20103 - 21080 (+)
Gene ID: k141_157136_26
Type: STP
Location: 21094 - 22080 (+)
Gene ID: k141_157136_27
Type: pfam
Location: 22095 - 22661 (+)
Gene ID: k141_157136_28
Type: TC
Location: 22658 - 23233 (+)
Gene ID: k141_157136_29
Type: TC
Location: 23202 - 23756 (+)
Gene ID: k141_157136_30
Type: TC
Location: 23763 - 24488 (+)
Gene ID: k141_157136_31
Type: pfam
Location: 24536 - 25969 (+)
Gene ID: k141_157136_32
Type: pfam
Location: 25992 - 26279 (+)
Gene ID: k141_157136_33
Type: TC
Location: 26362 - 26853 (+)
Gene ID: k141_157136_34
Type: pfam
Location: 26899 - 27753 (+)
Gene ID: k141_157136_35
Type: TC
Location: 27750 - 28022 (+)
Gene ID: k141_157136_36
Type: CAZyme
Location: 28061 - 28786 (-)
Gene ID: k141_157136_37
Type: peptidase
Location: 28783 - 29436 (-)
Gene ID: k141_157136_38
Type: STP
Location: 29669 - 32002 (-)
Gene ID: k141_157136_39
Type: TC
Location: 32138 - 33220 (-)
Gene ID: k141_157136_40
Type: TC
Location: 33220 - 34299 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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