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Cluster: CGMR048588_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_120408 k141_120408_46 45390 46622 + 9.B.146.1.6
pfam k141_120408 k141_120408_47 46644 48017 + Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N
TC k141_120408 k141_120408_48 48034 49224 + 2.A.103.1.3
CAZyme k141_120408 k141_120408_49 49236 50327 + GT28
pfam k141_120408 k141_120408_50 50320 51669 + Mur_ligase | Mur_ligase_C | Mur_ligase_M
NULL(UNKNOWN) k141_120408 k141_120408_51 51666 52388 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_120408 k141_120408_52 52393 53769 + 9.B.157.1.2
Gene ID: k141_120408_46
Type: TC
Location: 45390 - 46622 (+)
Gene ID: k141_120408_47
Type: pfam
Location: 46644 - 48017 (+)
Gene ID: k141_120408_48
Type: TC
Location: 48034 - 49224 (+)
Gene ID: k141_120408_49
Type: CAZyme
Location: 49236 - 50327 (+)
Gene ID: k141_120408_50
Type: pfam
Location: 50320 - 51669 (+)
Gene ID: k141_120408_51
Type:
Location: 51666 - 52388 (+)
Gene ID: k141_120408_52
Type: TC
Location: 52393 - 53769 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Flavobacteriales
→
Family
Flavobacteriaceae
→
Genus
Aequorivita
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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