Cluster: CGMR048564_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR048564
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_165916 | k141_165916_32 | 27580 | 29109 | - | 9.A.11.1.2 |
| pfam | k141_165916 | k141_165916_33 | 29247 | 29927 | + | DUF421 |
| pfam | k141_165916 | k141_165916_34 | 29927 | 30307 | + | DUF4363 |
| CAZyme | k141_165916 | k141_165916_35 | 30390 | 31208 | - | CE4 |
Gene ID: k141_165916_32
Type: TC
Location: 27580 - 29109 (-)
Type: TC
Location: 27580 - 29109 (-)
Gene ID: k141_165916_33
Type: pfam
Location: 29247 - 29927 (+)
Type: pfam
Location: 29247 - 29927 (+)
Gene ID: k141_165916_34
Type: pfam
Location: 29927 - 30307 (+)
Type: pfam
Location: 29927 - 30307 (+)
Gene ID: k141_165916_35
Type: CAZyme
Location: 30390 - 31208 (-)
Type: CAZyme
Location: 30390 - 31208 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA3818
Species
UBA3818 sp900557155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_165916_33 | vegetarian > omnivore | 1.54031 | 0.02158 |
| k141_165916_33 | vegetarian > vegan | 1.02414 | 0.00089 |
| k141_165916_34 | vegetarian > omnivore | 1.43445 | 0.02158 |
| k141_165916_34 | vegetarian > vegan | 1.55685 | 0.00089 |
| k141_165916_35 | vegetarian > vegan | 1.17778 | 0.00089 |