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Cluster: CGMR048564_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_166593 k141_166593_4 2226 2804 + 9.B.156.3.1
TC k141_166593 k141_166593_5 2819 3340 + 9.B.156.3.1
CAZyme k141_166593 k141_166593_6 3406 4827 - GT5
pfam k141_166593 k141_166593_7 4873 5997 - NTP_transferase | Hexapep_GlmU
pfam k141_166593 k141_166593_8 5994 7217 - NTP_transferase | Hexapep_GlmU
CAZyme k141_166593 k141_166593_9 7261 9216 - CBM48 | GH13_9
pfam k141_166593 k141_166593_10 9582 10607 - Gp_dh_N | Gp_dh_C
STP k141_166593 k141_166593_11 11013 12146 + HATPase_c
TC k141_166593 k141_166593_12 12233 13150 - 2.A.7.3.52
Gene ID: k141_166593_4
Type: TC
Location: 2226 - 2804 (+)
Gene ID: k141_166593_5
Type: TC
Location: 2819 - 3340 (+)
Gene ID: k141_166593_6
Type: CAZyme
Location: 3406 - 4827 (-)
Gene ID: k141_166593_7
Type: pfam
Location: 4873 - 5997 (-)
Gene ID: k141_166593_8
Type: pfam
Location: 5994 - 7217 (-)
Gene ID: k141_166593_9
Type: CAZyme
Location: 7261 - 9216 (-)
Gene ID: k141_166593_10
Type: pfam
Location: 9582 - 10607 (-)
Gene ID: k141_166593_11
Type: STP
Location: 11013 - 12146 (+)
Gene ID: k141_166593_12
Type: TC
Location: 12233 - 13150 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_166593_6 vegetarian > omnivore 1.04945 0.01810
k141_166593_6 vegetarian > vegan 2.26556 0.00089
k141_166593_8 vegan > omnivore 1.62752 0.04449

🧭 Explore Read Mapping of CGC

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