Cluster: CGMR048115_CGC27
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate: fructan
- Genome ID: CGMR048115
- CGC Family ID: CGCFAM_00017
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_129178 | k141_129178_37 | 37788 | 38585 | - | 2.A.79.2.1 |
| NULL(UNKNOWN) | k141_129178 | k141_129178_38 | 38569 | 38802 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_129178 | k141_129178_39 | 38959 | 40695 | - | SusD_RagB | SusD-like_3 |
| TC | k141_129178 | k141_129178_40 | 40715 | 43837 | - | 1.B.14.6.1 |
| TF | k141_129178 | k141_129178_41 | 43980 | 46715 | - | HTH_AraC |
| NULL(UNKNOWN) | k141_129178 | k141_129178_42 | 46741 | 46881 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_129178 | k141_129178_43 | 46949 | 48589 | + | GH32 |
| CAZyme | k141_129178 | k141_129178_44 | 48603 | 50453 | + | GH32 |
| TC | k141_129178 | k141_129178_45 | 50462 | 51646 | + | 2.A.1.7.17 |
| STP | k141_129178 | k141_129178_46 | 51668 | 52546 | + | PfkB |
| TC | k141_129178 | k141_129178_47 | 52615 | 54075 | - | 1.A.23.4.5 |
| TC | k141_129178 | k141_129178_48 | 54463 | 55902 | + | 4.C.1.1.6 |
Gene ID: k141_129178_37
Type: TC
Location: 37788 - 38585 (-)
Type: TC
Location: 37788 - 38585 (-)
Gene ID: k141_129178_38
Type:
Location: 38569 - 38802 (-)
Type:
Location: 38569 - 38802 (-)
Gene ID: k141_129178_39
Type: pfam
Location: 38959 - 40695 (-)
Type: pfam
Location: 38959 - 40695 (-)
Gene ID: k141_129178_40
Type: TC
Location: 40715 - 43837 (-)
Type: TC
Location: 40715 - 43837 (-)
Gene ID: k141_129178_41
Type: TF
Location: 43980 - 46715 (-)
Type: TF
Location: 43980 - 46715 (-)
Gene ID: k141_129178_42
Type:
Location: 46741 - 46881 (-)
Type:
Location: 46741 - 46881 (-)
Gene ID: k141_129178_43
Type: CAZyme
Location: 46949 - 48589 (+)
Type: CAZyme
Location: 46949 - 48589 (+)
Gene ID: k141_129178_44
Type: CAZyme
Location: 48603 - 50453 (+)
Type: CAZyme
Location: 48603 - 50453 (+)
Gene ID: k141_129178_45
Type: TC
Location: 50462 - 51646 (+)
Type: TC
Location: 50462 - 51646 (+)
Gene ID: k141_129178_46
Type: STP
Location: 51668 - 52546 (+)
Type: STP
Location: 51668 - 52546 (+)
Gene ID: k141_129178_47
Type: TC
Location: 52615 - 54075 (-)
Type: TC
Location: 52615 - 54075 (-)
Gene ID: k141_129178_48
Type: TC
Location: 54463 - 55902 (+)
Type: TC
Location: 54463 - 55902 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Paramuribaculum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.