Cluster: CGMR047957_CGC9
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR047957
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_178852 | k141_178852_48 | 45918 | 46628 | + | GT2 |
| pfam | k141_178852 | k141_178852_49 | 46630 | 46965 | + | DUF2304 |
| NULL(UNKNOWN) | k141_178852 | k141_178852_50 | 46955 | 48223 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_178852 | k141_178852_51 | 48223 | 49005 | + | GT2 |
| pfam | k141_178852 | k141_178852_52 | 49015 | 50490 | + | DUF2142 |
| NULL(UNKNOWN) | k141_178852 | k141_178852_53 | 50657 | 52405 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_178852 | k141_178852_54 | 52462 | 53388 | + | GT2 |
| pfam | k141_178852 | k141_178852_55 | 53457 | 54308 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | k141_178852 | k141_178852_56 | 54500 | 55648 | + | GT4 |
| CAZyme | k141_178852 | k141_178852_57 | 55645 | 56586 | + | GT2 |
| pfam | k141_178852 | k141_178852_58 | 56586 | 57392 | + | ABC2_membrane |
| TC | k141_178852 | k141_178852_59 | 57392 | 58615 | + | 3.A.1.103.5 |
| CAZyme | k141_178852 | k141_178852_60 | 58628 | 59977 | + | GT2 |
Gene ID: k141_178852_48
Type: CAZyme
Location: 45918 - 46628 (+)
Type: CAZyme
Location: 45918 - 46628 (+)
Gene ID: k141_178852_49
Type: pfam
Location: 46630 - 46965 (+)
Type: pfam
Location: 46630 - 46965 (+)
Gene ID: k141_178852_50
Type:
Location: 46955 - 48223 (+)
Type:
Location: 46955 - 48223 (+)
Gene ID: k141_178852_51
Type: CAZyme
Location: 48223 - 49005 (+)
Type: CAZyme
Location: 48223 - 49005 (+)
Gene ID: k141_178852_52
Type: pfam
Location: 49015 - 50490 (+)
Type: pfam
Location: 49015 - 50490 (+)
Gene ID: k141_178852_53
Type:
Location: 50657 - 52405 (+)
Type:
Location: 50657 - 52405 (+)
Gene ID: k141_178852_54
Type: CAZyme
Location: 52462 - 53388 (+)
Type: CAZyme
Location: 52462 - 53388 (+)
Gene ID: k141_178852_55
Type: pfam
Location: 53457 - 54308 (+)
Type: pfam
Location: 53457 - 54308 (+)
Gene ID: k141_178852_56
Type: CAZyme
Location: 54500 - 55648 (+)
Type: CAZyme
Location: 54500 - 55648 (+)
Gene ID: k141_178852_57
Type: CAZyme
Location: 55645 - 56586 (+)
Type: CAZyme
Location: 55645 - 56586 (+)
Gene ID: k141_178852_58
Type: pfam
Location: 56586 - 57392 (+)
Type: pfam
Location: 56586 - 57392 (+)
Gene ID: k141_178852_59
Type: TC
Location: 57392 - 58615 (+)
Type: TC
Location: 57392 - 58615 (+)
Gene ID: k141_178852_60
Type: CAZyme
Location: 58628 - 59977 (+)
Type: CAZyme
Location: 58628 - 59977 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus gordonii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.