Cluster: CGMR047957_CGC28
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR047957
- CGC Family ID: CGCFAM_00598
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_183620 | k141_183620_6 | 9502 | 11760 | - | GT51 |
| pfam | k141_183620 | k141_183620_7 | 11875 | 12747 | + | PseudoU_synth_2 |
| pfam | k141_183620 | k141_183620_8 | 12920 | 13891 | - | Acyl_transf_3 |
| CAZyme | k141_183620 | k141_183620_9 | 14156 | 17329 | - | GH25 |
| CAZyme | k141_183620 | k141_183620_10 | 17544 | 18599 | - | GT113 |
| STP | k141_183620 | k141_183620_11 | 18627 | 19730 | - | Pyr_redox |
| TC | k141_183620 | k141_183620_12 | 19740 | 21152 | - | 2.A.66.2.16 |
| NULL(UNKNOWN) | k141_183620 | k141_183620_13 | 21149 | 22309 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_183620 | k141_183620_14 | 22348 | 23313 | - | GT2 |
| pfam | k141_183620 | k141_183620_15 | 23348 | 24346 | - | Stealth_CR2 | Stealth_CR1 | Stealth_CR3 |
| CAZyme | k141_183620 | k141_183620_16 | 24349 | 25506 | - | GT4 |
| CAZyme | k141_183620 | k141_183620_17 | 25510 | 26682 | - | GT4 |
| TC | k141_183620 | k141_183620_18 | 26720 | 28096 | - | 9.B.18.1.2 |
| TC | k141_183620 | k141_183620_19 | 28116 | 28817 | - | 8.A.3.2.2 |
| TC | k141_183620 | k141_183620_20 | 28830 | 29522 | - | 8.A.3.2.3 |
Gene ID: k141_183620_6
Type: CAZyme
Location: 9502 - 11760 (-)
Type: CAZyme
Location: 9502 - 11760 (-)
Gene ID: k141_183620_7
Type: pfam
Location: 11875 - 12747 (+)
Type: pfam
Location: 11875 - 12747 (+)
Gene ID: k141_183620_8
Type: pfam
Location: 12920 - 13891 (-)
Type: pfam
Location: 12920 - 13891 (-)
Gene ID: k141_183620_9
Type: CAZyme
Location: 14156 - 17329 (-)
Type: CAZyme
Location: 14156 - 17329 (-)
Gene ID: k141_183620_10
Type: CAZyme
Location: 17544 - 18599 (-)
Type: CAZyme
Location: 17544 - 18599 (-)
Gene ID: k141_183620_11
Type: STP
Location: 18627 - 19730 (-)
Type: STP
Location: 18627 - 19730 (-)
Gene ID: k141_183620_12
Type: TC
Location: 19740 - 21152 (-)
Type: TC
Location: 19740 - 21152 (-)
Gene ID: k141_183620_13
Type:
Location: 21149 - 22309 (-)
Type:
Location: 21149 - 22309 (-)
Gene ID: k141_183620_14
Type: CAZyme
Location: 22348 - 23313 (-)
Type: CAZyme
Location: 22348 - 23313 (-)
Gene ID: k141_183620_15
Type: pfam
Location: 23348 - 24346 (-)
Type: pfam
Location: 23348 - 24346 (-)
Gene ID: k141_183620_16
Type: CAZyme
Location: 24349 - 25506 (-)
Type: CAZyme
Location: 24349 - 25506 (-)
Gene ID: k141_183620_17
Type: CAZyme
Location: 25510 - 26682 (-)
Type: CAZyme
Location: 25510 - 26682 (-)
Gene ID: k141_183620_18
Type: TC
Location: 26720 - 28096 (-)
Type: TC
Location: 26720 - 28096 (-)
Gene ID: k141_183620_19
Type: TC
Location: 28116 - 28817 (-)
Type: TC
Location: 28116 - 28817 (-)
Gene ID: k141_183620_20
Type: TC
Location: 28830 - 29522 (-)
Type: TC
Location: 28830 - 29522 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus gordonii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.