Cluster: CGMR047944_CGC5
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: CGMR047944
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_132444 | k141_132444_5 | 6477 | 7202 | - | 9.B.120.1.3 |
| TC | k141_132444 | k141_132444_6 | 7221 | 7976 | - | 3.A.1.3.15 |
| TC | k141_132444 | k141_132444_7 | 7951 | 8670 | - | 3.A.1.3.20 |
| STP | k141_132444 | k141_132444_8 | 8748 | 9605 | - | SBP_bac_3 |
| pfam | k141_132444 | k141_132444_9 | 9758 | 9925 | - | DUF6472 |
| CAZyme | k141_132444 | k141_132444_10 | 10145 | 12037 | + | CBM48 | GH13_9 |
| pfam | k141_132444 | k141_132444_11 | 12077 | 13294 | + | NTP_transferase | Hexapep_GlmU |
| pfam | k141_132444 | k141_132444_12 | 13291 | 14409 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | k141_132444 | k141_132444_13 | 14409 | 15830 | + | GT5 |
Gene ID: k141_132444_5
Type: TC
Location: 6477 - 7202 (-)
Type: TC
Location: 6477 - 7202 (-)
Gene ID: k141_132444_6
Type: TC
Location: 7221 - 7976 (-)
Type: TC
Location: 7221 - 7976 (-)
Gene ID: k141_132444_7
Type: TC
Location: 7951 - 8670 (-)
Type: TC
Location: 7951 - 8670 (-)
Gene ID: k141_132444_8
Type: STP
Location: 8748 - 9605 (-)
Type: STP
Location: 8748 - 9605 (-)
Gene ID: k141_132444_9
Type: pfam
Location: 9758 - 9925 (-)
Type: pfam
Location: 9758 - 9925 (-)
Gene ID: k141_132444_10
Type: CAZyme
Location: 10145 - 12037 (+)
Type: CAZyme
Location: 10145 - 12037 (+)
Gene ID: k141_132444_11
Type: pfam
Location: 12077 - 13294 (+)
Type: pfam
Location: 12077 - 13294 (+)
Gene ID: k141_132444_12
Type: pfam
Location: 13291 - 14409 (+)
Type: pfam
Location: 13291 - 14409 (+)
Gene ID: k141_132444_13
Type: CAZyme
Location: 14409 - 15830 (+)
Type: CAZyme
Location: 14409 - 15830 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
RGIG3926
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.