Cluster: CGMR047944_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR047944
- CGC Family ID: CGCFAM_00803
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_116335 | k141_116335_7 | 6159 | 8468 | - | GH95 |
| TF | k141_116335 | k141_116335_8 | 8480 | 9301 | - | HTH_AraC | HTH_AraC |
| pfam | k141_116335 | k141_116335_9 | 9442 | 10809 | + | MatE | MatE |
| CAZyme | k141_116335 | k141_116335_10 | 11094 | 12056 | + | GT2 |
| NULL(UNKNOWN) | k141_116335 | k141_116335_11 | 12264 | 13355 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_116335 | k141_116335_12 | 13713 | 14435 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_116335 | k141_116335_13 | 14600 | 17230 | - | 4.A.2.1.17 |
Gene ID: k141_116335_7
Type: CAZyme
Location: 6159 - 8468 (-)
Type: CAZyme
Location: 6159 - 8468 (-)
Gene ID: k141_116335_8
Type: TF
Location: 8480 - 9301 (-)
Type: TF
Location: 8480 - 9301 (-)
Gene ID: k141_116335_9
Type: pfam
Location: 9442 - 10809 (+)
Type: pfam
Location: 9442 - 10809 (+)
Gene ID: k141_116335_10
Type: CAZyme
Location: 11094 - 12056 (+)
Type: CAZyme
Location: 11094 - 12056 (+)
Gene ID: k141_116335_11
Type:
Location: 12264 - 13355 (+)
Type:
Location: 12264 - 13355 (+)
Gene ID: k141_116335_12
Type:
Location: 13713 - 14435 (-)
Type:
Location: 13713 - 14435 (-)
Gene ID: k141_116335_13
Type: TC
Location: 14600 - 17230 (-)
Type: TC
Location: 14600 - 17230 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
RGIG3926
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.