Cluster: CGMR047944_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR047944
- CGC Family ID: CGCFAM_04536
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_389947 | k141_389947_24 | 24209 | 25549 | - | 3.A.5.1.1 |
| STP | k141_389947 | k141_389947_25 | 25552 | 25860 | - | Sigma70_r4 |
| CAZyme | k141_389947 | k141_389947_26 | 26015 | 26980 | + | GH130_7 |
| NULL(UNKNOWN) | k141_389947 | k141_389947_27 | 27272 | 27508 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_389947 | k141_389947_28 | 27668 | 28495 | + | LysR_substrate |
| TC | k141_389947 | k141_389947_29 | 28590 | 29465 | + | 3.A.1.7.5 |
| TC | k141_389947 | k141_389947_30 | 29467 | 30348 | + | 3.A.1.7.5 |
Gene ID: k141_389947_24
Type: TC
Location: 24209 - 25549 (-)
Type: TC
Location: 24209 - 25549 (-)
Gene ID: k141_389947_25
Type: STP
Location: 25552 - 25860 (-)
Type: STP
Location: 25552 - 25860 (-)
Gene ID: k141_389947_26
Type: CAZyme
Location: 26015 - 26980 (+)
Type: CAZyme
Location: 26015 - 26980 (+)
Gene ID: k141_389947_27
Type:
Location: 27272 - 27508 (-)
Type:
Location: 27272 - 27508 (-)
Gene ID: k141_389947_28
Type: STP
Location: 27668 - 28495 (+)
Type: STP
Location: 27668 - 28495 (+)
Gene ID: k141_389947_29
Type: TC
Location: 28590 - 29465 (+)
Type: TC
Location: 28590 - 29465 (+)
Gene ID: k141_389947_30
Type: TC
Location: 29467 - 30348 (+)
Type: TC
Location: 29467 - 30348 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
RGIG3926
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.