Cluster: CGMR047934_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR047934
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_109705 | k141_109705_23 | 16943 | 18019 | + | 9.B.146.1.6 |
| pfam | k141_109705 | k141_109705_24 | 18128 | 19438 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | k141_109705 | k141_109705_25 | 19435 | 20643 | + | 2.A.103.1.3 |
| CAZyme | k141_109705 | k141_109705_26 | 20625 | 21695 | + | GT28 |
Gene ID: k141_109705_23
Type: TC
Location: 16943 - 18019 (+)
Type: TC
Location: 16943 - 18019 (+)
Gene ID: k141_109705_24
Type: pfam
Location: 18128 - 19438 (+)
Type: pfam
Location: 18128 - 19438 (+)
Gene ID: k141_109705_25
Type: TC
Location: 19435 - 20643 (+)
Type: TC
Location: 19435 - 20643 (+)
Gene ID: k141_109705_26
Type: CAZyme
Location: 20625 - 21695 (+)
Type: CAZyme
Location: 20625 - 21695 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio piger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_109705_26 | vegetarian > vegan | 1.04191 | 0.03588 |