Cluster: CGMR047934_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR047934
- CGC Family ID: CGCFAM_01452
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_293529 | k141_293529_52 | 60311 | 61219 | + | 3.A.1.4.1 |
| TC | k141_293529 | k141_293529_53 | 61226 | 62461 | + | 3.A.1.4.1 |
| TC | k141_293529 | k141_293529_54 | 62458 | 63246 | + | 3.A.1.4.10 |
| TC | k141_293529 | k141_293529_55 | 63239 | 63943 | + | 3.A.1.4.10 |
| NULL(UNKNOWN) | k141_293529 | k141_293529_56 | 64097 | 64312 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_293529 | k141_293529_57 | 64405 | 65490 | - | GT1 |
Gene ID: k141_293529_52
Type: TC
Location: 60311 - 61219 (+)
Type: TC
Location: 60311 - 61219 (+)
Gene ID: k141_293529_53
Type: TC
Location: 61226 - 62461 (+)
Type: TC
Location: 61226 - 62461 (+)
Gene ID: k141_293529_54
Type: TC
Location: 62458 - 63246 (+)
Type: TC
Location: 62458 - 63246 (+)
Gene ID: k141_293529_55
Type: TC
Location: 63239 - 63943 (+)
Type: TC
Location: 63239 - 63943 (+)
Gene ID: k141_293529_56
Type:
Location: 64097 - 64312 (-)
Type:
Location: 64097 - 64312 (-)
Gene ID: k141_293529_57
Type: CAZyme
Location: 64405 - 65490 (-)
Type: CAZyme
Location: 64405 - 65490 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio piger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.