Cluster: CGMR047934_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR047934
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_61027 | k141_61027_33 | 37304 | 38914 | - | GT9 |
| pfam | k141_61027 | k141_61027_34 | 39316 | 39951 | - | TraT |
| NULL(UNKNOWN) | k141_61027 | k141_61027_35 | 40116 | 40763 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_61027 | k141_61027_36 | 41080 | 43332 | + | 3.A.7.7.1 |
| pfam | k141_61027 | k141_61027_37 | 43316 | 44434 | + | XdhC_CoxI | XdhC_C |
| TC | k141_61027 | k141_61027_38 | 44688 | 45605 | + | 2.A.6.2.6 |
Gene ID: k141_61027_33
Type: CAZyme
Location: 37304 - 38914 (-)
Type: CAZyme
Location: 37304 - 38914 (-)
Gene ID: k141_61027_34
Type: pfam
Location: 39316 - 39951 (-)
Type: pfam
Location: 39316 - 39951 (-)
Gene ID: k141_61027_35
Type:
Location: 40116 - 40763 (-)
Type:
Location: 40116 - 40763 (-)
Gene ID: k141_61027_36
Type: TC
Location: 41080 - 43332 (+)
Type: TC
Location: 41080 - 43332 (+)
Gene ID: k141_61027_37
Type: pfam
Location: 43316 - 44434 (+)
Type: pfam
Location: 43316 - 44434 (+)
Gene ID: k141_61027_38
Type: TC
Location: 44688 - 45605 (+)
Type: TC
Location: 44688 - 45605 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio piger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.