Cluster: CGMR047934_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR047934
- CGC Family ID: CGCFAM_08629
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_184712 | k141_184712_3 | 1705 | 3135 | - | 8.A.1.3.3 |
| TC | k141_184712 | k141_184712_4 | 3128 | 4894 | - | 3.A.1.110.10 |
| STP | k141_184712 | k141_184712_5 | 5332 | 5856 | - | HTH_7 |
| NULL(UNKNOWN) | k141_184712 | k141_184712_6 | 6416 | 8029 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_184712 | k141_184712_7 | 8162 | 9073 | + | GT2 |
Gene ID: k141_184712_3
Type: TC
Location: 1705 - 3135 (-)
Type: TC
Location: 1705 - 3135 (-)
Gene ID: k141_184712_4
Type: TC
Location: 3128 - 4894 (-)
Type: TC
Location: 3128 - 4894 (-)
Gene ID: k141_184712_5
Type: STP
Location: 5332 - 5856 (-)
Type: STP
Location: 5332 - 5856 (-)
Gene ID: k141_184712_6
Type:
Location: 6416 - 8029 (+)
Type:
Location: 6416 - 8029 (+)
Gene ID: k141_184712_7
Type: CAZyme
Location: 8162 - 9073 (+)
Type: CAZyme
Location: 8162 - 9073 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio piger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.