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Cluster: CGMR047934_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_186720 k141_186720_5 3984 5243 + 2.A.40.1.4
pfam k141_186720 k141_186720_6 5584 6486 - EamA | EamA
NULL(UNKNOWN) k141_186720 k141_186720_7 6597 7592 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_186720 k141_186720_8 7677 8759 + GT4
NULL(UNKNOWN) k141_186720 k141_186720_9 8756 9199 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_186720 k141_186720_10 9207 10367 + GT21
TC k141_186720 k141_186720_11 10433 11623 + 3.A.1.122.1
CAZyme k141_186720 k141_186720_12 11631 13580 + GT4
pfam k141_186720 k141_186720_13 13733 14740 + Acetyltransf_6
CAZyme k141_186720 k141_186720_14 15047 19297 - GT3 | GT35
CAZyme k141_186720 k141_186720_15 19402 20613 - GH57
CAZyme k141_186720 k141_186720_16 20615 22078 - GT4
CAZyme k141_186720 k141_186720_17 22078 24126 - GH133
pfam k141_186720 k141_186720_18 24391 26478 - HD_5
peptidase k141_186720 k141_186720_19 26482 27192 - C93.UPW
TC k141_186720 k141_186720_20 27639 28985 + 3.A.1.109.4
TC k141_186720 k141_186720_21 29139 31442 + 3.A.1.109.3
TC k141_186720 k141_186720_22 31429 33102 + 3.A.1.109.4
TC k141_186720 k141_186720_23 33124 35193 + 8.A.59.4.2
NULL(UNKNOWN) k141_186720 k141_186720_24 35269 35865 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_186720 k141_186720_25 36062 36469 + Molybdopterin | Molybdop_Fe4S4
TC k141_186720 k141_186720_26 36518 38092 + 3.D.1.9.2
pfam k141_186720 k141_186720_27 38096 40015 + NAD_binding_1 | FAD_binding_6 | DHODB_Fe-S_bind | Fer4_22
TC k141_186720 k141_186720_28 40283 41137 - 2.A.7.3.6
Gene ID: k141_186720_5
Type: TC
Location: 3984 - 5243 (+)
Gene ID: k141_186720_6
Type: pfam
Location: 5584 - 6486 (-)
Gene ID: k141_186720_7
Type:
Location: 6597 - 7592 (-)
Gene ID: k141_186720_8
Type: CAZyme
Location: 7677 - 8759 (+)
Gene ID: k141_186720_9
Type:
Location: 8756 - 9199 (+)
Gene ID: k141_186720_10
Type: CAZyme
Location: 9207 - 10367 (+)
Gene ID: k141_186720_11
Type: TC
Location: 10433 - 11623 (+)
Gene ID: k141_186720_12
Type: CAZyme
Location: 11631 - 13580 (+)
Gene ID: k141_186720_13
Type: pfam
Location: 13733 - 14740 (+)
Gene ID: k141_186720_14
Type: CAZyme
Location: 15047 - 19297 (-)
Gene ID: k141_186720_15
Type: CAZyme
Location: 19402 - 20613 (-)
Gene ID: k141_186720_16
Type: CAZyme
Location: 20615 - 22078 (-)
Gene ID: k141_186720_17
Type: CAZyme
Location: 22078 - 24126 (-)
Gene ID: k141_186720_18
Type: pfam
Location: 24391 - 26478 (-)
Gene ID: k141_186720_19
Type: peptidase
Location: 26482 - 27192 (-)
Gene ID: k141_186720_20
Type: TC
Location: 27639 - 28985 (+)
Gene ID: k141_186720_21
Type: TC
Location: 29139 - 31442 (+)
Gene ID: k141_186720_22
Type: TC
Location: 31429 - 33102 (+)
Gene ID: k141_186720_23
Type: TC
Location: 33124 - 35193 (+)
Gene ID: k141_186720_24
Type:
Location: 35269 - 35865 (-)
Gene ID: k141_186720_25
Type: pfam
Location: 36062 - 36469 (+)
Gene ID: k141_186720_26
Type: TC
Location: 36518 - 38092 (+)
Gene ID: k141_186720_27
Type: pfam
Location: 38096 - 40015 (+)
Gene ID: k141_186720_28
Type: TC
Location: 40283 - 41137 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_186720_8 vegetarian > vegan 1.00347 0.03588
k141_186720_20 vegetarian > vegan 1.32177 0.03588

🧭 Explore Read Mapping of CGC

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