Cluster: CGMR047672_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR047672
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_51812 | k141_51812_21 | 28020 | 29840 | + | 1.B.33.2.4 |
| TC | k141_51812 | k141_51812_22 | 29843 | 33817 | + | 9.B.22.1.1 |
| peptidase | k141_51812 | k141_51812_23 | 33832 | 35406 | + | S16.A10 |
| NULL(UNKNOWN) | k141_51812 | k141_51812_24 | 35501 | 35809 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_51812 | k141_51812_25 | 35855 | 37282 | - | 9.B.18.1.2 |
| CAZyme | k141_51812 | k141_51812_26 | 37473 | 39533 | - | GH13_21 |
Gene ID: k141_51812_21
Type: TC
Location: 28020 - 29840 (+)
Type: TC
Location: 28020 - 29840 (+)
Gene ID: k141_51812_22
Type: TC
Location: 29843 - 33817 (+)
Type: TC
Location: 29843 - 33817 (+)
Gene ID: k141_51812_23
Type: peptidase
Location: 33832 - 35406 (+)
Type: peptidase
Location: 33832 - 35406 (+)
Gene ID: k141_51812_24
Type:
Location: 35501 - 35809 (+)
Type:
Location: 35501 - 35809 (+)
Gene ID: k141_51812_25
Type: TC
Location: 35855 - 37282 (-)
Type: TC
Location: 35855 - 37282 (-)
Gene ID: k141_51812_26
Type: CAZyme
Location: 37473 - 39533 (-)
Type: CAZyme
Location: 37473 - 39533 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Species
Succinivibrio sp003456415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.