Cluster: CGMR047672_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR047672
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_433435 | k141_433435_10 | 9393 | 10520 | + | 9.B.160.1.10 |
| pfam | k141_433435 | k141_433435_11 | 10529 | 11500 | - | Radical_SAM | BATS |
| pfam | k141_433435 | k141_433435_12 | 11551 | 15759 | - | BcrAD_BadFG | BcrAD_BadFG | DUF2229 |
| TC | k141_433435 | k141_433435_13 | 15996 | 17321 | + | 2.A.40.7.6 |
| TC | k141_433435 | k141_433435_14 | 17542 | 18747 | + | 3.A.1.1.2 |
| STP | k141_433435 | k141_433435_15 | 18840 | 19250 | + | NUDIX |
| CAZyme | k141_433435 | k141_433435_16 | 19343 | 20677 | - | GH1 |
Gene ID: k141_433435_10
Type: TC
Location: 9393 - 10520 (+)
Type: TC
Location: 9393 - 10520 (+)
Gene ID: k141_433435_11
Type: pfam
Location: 10529 - 11500 (-)
Type: pfam
Location: 10529 - 11500 (-)
Gene ID: k141_433435_12
Type: pfam
Location: 11551 - 15759 (-)
Type: pfam
Location: 11551 - 15759 (-)
Gene ID: k141_433435_13
Type: TC
Location: 15996 - 17321 (+)
Type: TC
Location: 15996 - 17321 (+)
Gene ID: k141_433435_14
Type: TC
Location: 17542 - 18747 (+)
Type: TC
Location: 17542 - 18747 (+)
Gene ID: k141_433435_15
Type: STP
Location: 18840 - 19250 (+)
Type: STP
Location: 18840 - 19250 (+)
Gene ID: k141_433435_16
Type: CAZyme
Location: 19343 - 20677 (-)
Type: CAZyme
Location: 19343 - 20677 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Species
Succinivibrio sp003456415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.