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Cluster: CGMR047626_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_51169 k141_51169_1 22 804 - 2.A.5.5.2
TF k141_51169 k141_51169_2 801 1328 - FUR
TF k141_51169 k141_51169_3 1496 1930 + Fe_dep_repress
TC k141_51169 k141_51169_4 1890 2591 - 9.B.143.2.3
STP k141_51169 k141_51169_5 2769 4142 + PALP
pfam k141_51169 k141_51169_6 4281 4724 - Sugar_tr
TC k141_51169 k141_51169_7 4903 6375 - 2.A.2.1.2
TF k141_51169 k141_51169_8 6506 7738 - HTH_AraC | HTH_AraC
pfam k141_51169 k141_51169_9 7757 8392 - Hydrolase | HAD_2
CAZyme k141_51169 k141_51169_10 8477 10234 - GH3
TF k141_51169 k141_51169_11 10344 11462 - HTH_AraC
CAZyme k141_51169 k141_51169_12 11679 13160 + GH30_1
Gene ID: k141_51169_1
Type: TC
Location: 22 - 804 (-)
Gene ID: k141_51169_2
Type: TF
Location: 801 - 1328 (-)
Gene ID: k141_51169_3
Type: TF
Location: 1496 - 1930 (+)
Gene ID: k141_51169_4
Type: TC
Location: 1890 - 2591 (-)
Gene ID: k141_51169_5
Type: STP
Location: 2769 - 4142 (+)
Gene ID: k141_51169_6
Type: pfam
Location: 4281 - 4724 (-)
Gene ID: k141_51169_7
Type: TC
Location: 4903 - 6375 (-)
Gene ID: k141_51169_8
Type: TF
Location: 6506 - 7738 (-)
Gene ID: k141_51169_9
Type: pfam
Location: 7757 - 8392 (-)
Gene ID: k141_51169_10
Type: CAZyme
Location: 8477 - 10234 (-)
Gene ID: k141_51169_11
Type: TF
Location: 10344 - 11462 (-)
Gene ID: k141_51169_12
Type: CAZyme
Location: 11679 - 13160 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_51169_5 omnivore > vegan 1.60218 0.02523
k141_51169_5 vegetarian > vegan 1.08145 0.01287

🧭 Explore Read Mapping of CGC

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