Cluster: CGMR047626_CGC34
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR047626
- CGC Family ID: CGCFAM_00051
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_189500 | k141_189500_1 | 1 | 666 | - | 9.B.10.1.1 |
| pfam | k141_189500 | k141_189500_2 | 851 | 1489 | + | LUD_dom |
| NULL(UNKNOWN) | k141_189500 | k141_189500_3 | 1997 | 2326 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_189500 | k141_189500_4 | 2332 | 3774 | - | GH43_35 |
| TF | k141_189500 | k141_189500_5 | 3940 | 5070 | + | HTH_AraC |
| CAZyme | k141_189500 | k141_189500_6 | 5173 | 7278 | - | GH3 |
Gene ID: k141_189500_1
Type: TC
Location: 1 - 666 (-)
Type: TC
Location: 1 - 666 (-)
Gene ID: k141_189500_2
Type: pfam
Location: 851 - 1489 (+)
Type: pfam
Location: 851 - 1489 (+)
Gene ID: k141_189500_3
Type:
Location: 1997 - 2326 (+)
Type:
Location: 1997 - 2326 (+)
Gene ID: k141_189500_4
Type: CAZyme
Location: 2332 - 3774 (-)
Type: CAZyme
Location: 2332 - 3774 (-)
Gene ID: k141_189500_5
Type: TF
Location: 3940 - 5070 (+)
Type: TF
Location: 3940 - 5070 (+)
Gene ID: k141_189500_6
Type: CAZyme
Location: 5173 - 7278 (-)
Type: CAZyme
Location: 5173 - 7278 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pullilachnospira_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.