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Cluster: CGMR047626_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_71819 k141_71819_6 6143 7321 + 2.A.1.7.17
CAZyme k141_71819 k141_71819_7 7351 9765 - GH3
CAZyme k141_71819 k141_71819_8 9867 10754 - GT2
CAZyme k141_71819 k141_71819_9 10755 11570 - GT111
CAZyme k141_71819 k141_71819_10 11681 12808 - GT2
pfam k141_71819 k141_71819_11 13031 13177 - FeoB_associated
TC k141_71819 k141_71819_12 13203 15584 - 9.A.8.1.6
STP k141_71819 k141_71819_13 15586 15816 - FeoA
STP k141_71819 k141_71819_14 15839 16057 - FeoA
TC k141_71819 k141_71819_15 16339 17760 + 2.A.66.1.37
STP k141_71819 k141_71819_16 17757 18335 + TetR_N
CAZyme k141_71819 k141_71819_17 18359 19126 - CE4
Gene ID: k141_71819_6
Type: TC
Location: 6143 - 7321 (+)
Gene ID: k141_71819_7
Type: CAZyme
Location: 7351 - 9765 (-)
Gene ID: k141_71819_8
Type: CAZyme
Location: 9867 - 10754 (-)
Gene ID: k141_71819_9
Type: CAZyme
Location: 10755 - 11570 (-)
Gene ID: k141_71819_10
Type: CAZyme
Location: 11681 - 12808 (-)
Gene ID: k141_71819_11
Type: pfam
Location: 13031 - 13177 (-)
Gene ID: k141_71819_12
Type: TC
Location: 13203 - 15584 (-)
Gene ID: k141_71819_13
Type: STP
Location: 15586 - 15816 (-)
Gene ID: k141_71819_14
Type: STP
Location: 15839 - 16057 (-)
Gene ID: k141_71819_15
Type: TC
Location: 16339 - 17760 (+)
Gene ID: k141_71819_16
Type: STP
Location: 17757 - 18335 (+)
Gene ID: k141_71819_17
Type: CAZyme
Location: 18359 - 19126 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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