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Cluster: CGMR047626_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_102745 k141_102745_62 55977 57362 + 9.B.18.1.3
CAZyme k141_102745 k141_102745_63 57441 58619 + GT4
CAZyme k141_102745 k141_102745_64 58616 59476 + GT2
NULL(UNKNOWN) k141_102745 k141_102745_65 59451 60857 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_102745 k141_102745_66 60854 61627 + 3.A.1.103.4
TC k141_102745 k141_102745_67 61631 63457 + 3.A.1.103.4
pfam k141_102745 k141_102745_68 63476 65005 + LytR_cpsA_psr
NULL(UNKNOWN) k141_102745 k141_102745_69 65026 67236 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_102745 k141_102745_70 67249 68697 + GT2
CAZyme k141_102745 k141_102745_71 68690 69796 + GT2
CAZyme k141_102745 k141_102745_72 69808 71019 + GT2
Gene ID: k141_102745_62
Type: TC
Location: 55977 - 57362 (+)
Gene ID: k141_102745_63
Type: CAZyme
Location: 57441 - 58619 (+)
Gene ID: k141_102745_64
Type: CAZyme
Location: 58616 - 59476 (+)
Gene ID: k141_102745_65
Type:
Location: 59451 - 60857 (+)
Gene ID: k141_102745_66
Type: TC
Location: 60854 - 61627 (+)
Gene ID: k141_102745_67
Type: TC
Location: 61631 - 63457 (+)
Gene ID: k141_102745_68
Type: pfam
Location: 63476 - 65005 (+)
Gene ID: k141_102745_69
Type:
Location: 65026 - 67236 (+)
Gene ID: k141_102745_70
Type: CAZyme
Location: 67249 - 68697 (+)
Gene ID: k141_102745_71
Type: CAZyme
Location: 68690 - 69796 (+)
Gene ID: k141_102745_72
Type: CAZyme
Location: 69808 - 71019 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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