Cluster: CGMR047610_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR047610
- CGC Family ID: CGCFAM_01076
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_29989 | k141_29989_24 | 20375 | 22294 | - | 4.A.1.2.2 |
| TF | k141_29989 | k141_29989_25 | 22465 | 23178 | + | GntR |
| CAZyme | k141_29989 | k141_29989_26 | 23189 | 24850 | + | GH13_29 |
Gene ID: k141_29989_24
Type: TC
Location: 20375 - 22294 (-)
Type: TC
Location: 20375 - 22294 (-)
Gene ID: k141_29989_25
Type: TF
Location: 22465 - 23178 (+)
Type: TF
Location: 22465 - 23178 (+)
Gene ID: k141_29989_26
Type: CAZyme
Location: 23189 - 24850 (+)
Type: CAZyme
Location: 23189 - 24850 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Species
Limosilactobacillus fermentum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.