Cluster: CGMR047029_CGC22
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate: beta-mannan
- Genome ID: CGMR047029
- CGC Family ID: CGCFAM_00226
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1260834 | k141_1260834_1 | 1 | 8304 | + | CBM23 | CBM27 | GH26 |
| TC | k141_1260834 | k141_1260834_2 | 8680 | 10062 | + | 3.A.1.1.44 |
| TC | k141_1260834 | k141_1260834_3 | 10139 | 11122 | + | 3.A.1.1.28 |
| TC | k141_1260834 | k141_1260834_4 | 11119 | 11967 | + | 3.A.1.1.34 |
| CAZyme | k141_1260834 | k141_1260834_5 | 11996 | 13018 | + | GH130_2 |
| pfam | k141_1260834 | k141_1260834_6 | 13020 | 14213 | + | GlcNAc_2-epim |
| TC | k141_1260834 | k141_1260834_7 | 14219 | 14887 | + | 9.B.28.1.3 |
| NULL(UNKNOWN) | k141_1260834 | k141_1260834_8 | 14850 | 15533 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_1260834 | k141_1260834_9 | 15511 | 16689 | + | GH130_1 |
| pfam | k141_1260834 | k141_1260834_10 | 16862 | 18571 | + | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| pfam | k141_1260834 | k141_1260834_11 | 18568 | 19506 | + | PMI_typeI_cat | MPI_cupin_dom |
| CAZyme | k141_1260834 | k141_1260834_12 | 19520 | 20638 | + | CE2 |
| CAZyme | k141_1260834 | k141_1260834_13 | 20642 | 21991 | + | GH1 |
Gene ID: k141_1260834_1
Type: CAZyme
Location: 1 - 8304 (+)
Type: CAZyme
Location: 1 - 8304 (+)
Gene ID: k141_1260834_2
Type: TC
Location: 8680 - 10062 (+)
Type: TC
Location: 8680 - 10062 (+)
Gene ID: k141_1260834_3
Type: TC
Location: 10139 - 11122 (+)
Type: TC
Location: 10139 - 11122 (+)
Gene ID: k141_1260834_4
Type: TC
Location: 11119 - 11967 (+)
Type: TC
Location: 11119 - 11967 (+)
Gene ID: k141_1260834_5
Type: CAZyme
Location: 11996 - 13018 (+)
Type: CAZyme
Location: 11996 - 13018 (+)
Gene ID: k141_1260834_6
Type: pfam
Location: 13020 - 14213 (+)
Type: pfam
Location: 13020 - 14213 (+)
Gene ID: k141_1260834_7
Type: TC
Location: 14219 - 14887 (+)
Type: TC
Location: 14219 - 14887 (+)
Gene ID: k141_1260834_8
Type:
Location: 14850 - 15533 (+)
Type:
Location: 14850 - 15533 (+)
Gene ID: k141_1260834_9
Type: CAZyme
Location: 15511 - 16689 (+)
Type: CAZyme
Location: 15511 - 16689 (+)
Gene ID: k141_1260834_10
Type: pfam
Location: 16862 - 18571 (+)
Type: pfam
Location: 16862 - 18571 (+)
Gene ID: k141_1260834_11
Type: pfam
Location: 18568 - 19506 (+)
Type: pfam
Location: 18568 - 19506 (+)
Gene ID: k141_1260834_12
Type: CAZyme
Location: 19520 - 20638 (+)
Type: CAZyme
Location: 19520 - 20638 (+)
Gene ID: k141_1260834_13
Type: CAZyme
Location: 20642 - 21991 (+)
Type: CAZyme
Location: 20642 - 21991 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
CAG-274
Genus
JAJQCI01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.