Cluster: CGMR046849_CGC4
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR046849
- CGC Family ID: CGCFAM_01934
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_341058 | k141_341058_9 | 9399 | 10187 | - | 3.A.1.103.1 |
| TC | k141_341058 | k141_341058_10 | 10177 | 11067 | - | 3.A.1.104.1 |
| pfam | k141_341058 | k141_341058_11 | 11082 | 12218 | - | LytR_cpsA_psr |
| TC | k141_341058 | k141_341058_12 | 12218 | 13357 | - | 9.B.146.1.1 |
| TC | k141_341058 | k141_341058_13 | 13641 | 14420 | + | 3.A.1.103.6 |
| TC | k141_341058 | k141_341058_14 | 14432 | 16246 | + | 3.A.1.103.5 |
| pfam | k141_341058 | k141_341058_15 | 16249 | 17400 | + | LicD |
| pfam | k141_341058 | k141_341058_16 | 17394 | 19667 | + | DUF6541 |
| CAZyme | k141_341058 | k141_341058_17 | 19739 | 20788 | - | GT2 |
| pfam | k141_341058 | k141_341058_18 | 20798 | 21187 | - | DUF2304 |
| CAZyme | k141_341058 | k141_341058_19 | 21190 | 21894 | - | GT2 |
| CAZyme | k141_341058 | k141_341058_20 | 22001 | 23158 | - | GT4 |
Gene ID: k141_341058_9
Type: TC
Location: 9399 - 10187 (-)
Type: TC
Location: 9399 - 10187 (-)
Gene ID: k141_341058_10
Type: TC
Location: 10177 - 11067 (-)
Type: TC
Location: 10177 - 11067 (-)
Gene ID: k141_341058_11
Type: pfam
Location: 11082 - 12218 (-)
Type: pfam
Location: 11082 - 12218 (-)
Gene ID: k141_341058_12
Type: TC
Location: 12218 - 13357 (-)
Type: TC
Location: 12218 - 13357 (-)
Gene ID: k141_341058_13
Type: TC
Location: 13641 - 14420 (+)
Type: TC
Location: 13641 - 14420 (+)
Gene ID: k141_341058_14
Type: TC
Location: 14432 - 16246 (+)
Type: TC
Location: 14432 - 16246 (+)
Gene ID: k141_341058_15
Type: pfam
Location: 16249 - 17400 (+)
Type: pfam
Location: 16249 - 17400 (+)
Gene ID: k141_341058_16
Type: pfam
Location: 17394 - 19667 (+)
Type: pfam
Location: 17394 - 19667 (+)
Gene ID: k141_341058_17
Type: CAZyme
Location: 19739 - 20788 (-)
Type: CAZyme
Location: 19739 - 20788 (-)
Gene ID: k141_341058_18
Type: pfam
Location: 20798 - 21187 (-)
Type: pfam
Location: 20798 - 21187 (-)
Gene ID: k141_341058_19
Type: CAZyme
Location: 21190 - 21894 (-)
Type: CAZyme
Location: 21190 - 21894 (-)
Gene ID: k141_341058_20
Type: CAZyme
Location: 22001 - 23158 (-)
Type: CAZyme
Location: 22001 - 23158 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Xiamenia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.