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Cluster: CGMR046257_CGC60

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_3692 k141_3692_41 41346 43769 + 1.B.11.5.1
NULL(UNKNOWN) k141_3692 k141_3692_42 43760 44359 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_3692 k141_3692_43 44402 44725 - 2.A.78.2.3
TC k141_3692 k141_3692_44 44725 45384 - 2.A.78.2.3
TF k141_3692 k141_3692_45 45489 46037 + HTH_3
TF k141_3692 k141_3692_46 46055 47050 + LacI
CAZyme k141_3692 k141_3692_47 47155 49278 + GH36
TC k141_3692 k141_3692_48 49323 50600 + 2.A.1.5.4
pfam k141_3692 k141_3692_49 50588 50902 - rhaM
pfam k141_3692 k141_3692_50 50899 52047 - Fe-ADH | Fe-ADH_2 | ADH_Fe_C
TC k141_3692 k141_3692_51 52145 53140 - 3.A.1.2.8
TC k141_3692 k141_3692_52 53149 54153 - 3.A.1.2.9
TC k141_3692 k141_3692_53 54153 55655 - 3.A.1.2.9
STP k141_3692 k141_3692_54 55901 57157 + Aminotran_1_2
TC k141_3692 k141_3692_55 57162 57617 - 5.A.3.11.1
Gene ID: k141_3692_41
Type: TC
Location: 41346 - 43769 (+)
Gene ID: k141_3692_42
Type:
Location: 43760 - 44359 (+)
Gene ID: k141_3692_43
Type: TC
Location: 44402 - 44725 (-)
Gene ID: k141_3692_44
Type: TC
Location: 44725 - 45384 (-)
Gene ID: k141_3692_45
Type: TF
Location: 45489 - 46037 (+)
Gene ID: k141_3692_46
Type: TF
Location: 46055 - 47050 (+)
Gene ID: k141_3692_47
Type: CAZyme
Location: 47155 - 49278 (+)
Gene ID: k141_3692_48
Type: TC
Location: 49323 - 50600 (+)
Gene ID: k141_3692_49
Type: pfam
Location: 50588 - 50902 (-)
Gene ID: k141_3692_50
Type: pfam
Location: 50899 - 52047 (-)
Gene ID: k141_3692_51
Type: TC
Location: 52145 - 53140 (-)
Gene ID: k141_3692_52
Type: TC
Location: 53149 - 54153 (-)
Gene ID: k141_3692_53
Type: TC
Location: 54153 - 55655 (-)
Gene ID: k141_3692_54
Type: STP
Location: 55901 - 57157 (+)
Gene ID: k141_3692_55
Type: TC
Location: 57162 - 57617 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_3692_46 vegetarian > vegan 1.18461 0.04707
k141_3692_50 vegetarian > vegan 1.06507 0.04707
k141_3692_51 vegetarian > vegan 1.04857 0.04707

🧭 Explore Read Mapping of CGC

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