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Cluster: CGMR046257_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6722 k141_6722_92 92399 94918 - 1.B.11.3.6
pfam k141_6722 k141_6722_93 94949 95641 - PapD_N | PapD_C
pfam k141_6722 k141_6722_94 95780 96355 - Fimbrial
TC k141_6722 k141_6722_95 96862 98010 + 3.A.6.2.1
TC k141_6722 k141_6722_96 98003 100081 + 3.A.6.2.1
pfam k141_6722 k141_6722_97 100081 100473 + FlhE
TC k141_6722 k141_6722_98 100735 102318 + 2.A.2.5.2
CAZyme k141_6722 k141_6722_99 102320 103462 + GH105
pfam k141_6722 k141_6722_100 103538 105271 - tRNA-synt_1d | Arg_tRNA_synt_N | DALR_1
pfam k141_6722 k141_6722_101 105511 106071 + YecM
TC k141_6722 k141_6722_102 106150 106893 + 9.B.158.1.2
TF k141_6722 k141_6722_103 107152 107832 - HTH_11
STP k141_6722 k141_6722_104 107847 108212 - Glyoxalase
TC k141_6722 k141_6722_105 108354 109325 - 2.A.6.4.1
TC k141_6722 k141_6722_106 109336 111150 - 2.A.6.4.1
TC k141_6722 k141_6722_107 111211 111543 - 3.A.5.1.1
Gene ID: k141_6722_92
Type: TC
Location: 92399 - 94918 (-)
Gene ID: k141_6722_93
Type: pfam
Location: 94949 - 95641 (-)
Gene ID: k141_6722_94
Type: pfam
Location: 95780 - 96355 (-)
Gene ID: k141_6722_95
Type: TC
Location: 96862 - 98010 (+)
Gene ID: k141_6722_96
Type: TC
Location: 98003 - 100081 (+)
Gene ID: k141_6722_97
Type: pfam
Location: 100081 - 100473 (+)
Gene ID: k141_6722_98
Type: TC
Location: 100735 - 102318 (+)
Gene ID: k141_6722_99
Type: CAZyme
Location: 102320 - 103462 (+)
Gene ID: k141_6722_100
Type: pfam
Location: 103538 - 105271 (-)
Gene ID: k141_6722_101
Type: pfam
Location: 105511 - 106071 (+)
Gene ID: k141_6722_102
Type: TC
Location: 106150 - 106893 (+)
Gene ID: k141_6722_103
Type: TF
Location: 107152 - 107832 (-)
Gene ID: k141_6722_104
Type: STP
Location: 107847 - 108212 (-)
Gene ID: k141_6722_105
Type: TC
Location: 108354 - 109325 (-)
Gene ID: k141_6722_106
Type: TC
Location: 109336 - 111150 (-)
Gene ID: k141_6722_107
Type: TC
Location: 111211 - 111543 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_6722_97 vegetarian > vegan 1.06278 0.04707
k141_6722_98 vegetarian > omnivore 1.69020 0.04459
k141_6722_98 vegetarian > vegan 1.04310 0.04707
k141_6722_102 vegetarian > vegan 1.49261 0.04707

🧭 Explore Read Mapping of CGC

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