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Cluster: CGMR046257_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6722 k141_6722_31 30163 31533 - 3.A.6.2.1
TC k141_6722 k141_6722_32 31533 32240 - 3.A.6.2.1
pfam k141_6722 k141_6722_33 32233 33231 - FliG_C | FliG_M | FliG_N
TC k141_6722 k141_6722_34 33224 34891 - 3.A.6.2.1
pfam k141_6722 k141_6722_35 35120 35434 + FliE
pfam k141_6722 k141_6722_36 35510 35923 + YedD
CAZyme k141_6722 k141_6722_37 36016 37503 - GH13_5
Gene ID: k141_6722_31
Type: TC
Location: 30163 - 31533 (-)
Gene ID: k141_6722_32
Type: TC
Location: 31533 - 32240 (-)
Gene ID: k141_6722_33
Type: pfam
Location: 32233 - 33231 (-)
Gene ID: k141_6722_34
Type: TC
Location: 33224 - 34891 (-)
Gene ID: k141_6722_35
Type: pfam
Location: 35120 - 35434 (+)
Gene ID: k141_6722_36
Type: pfam
Location: 35510 - 35923 (+)
Gene ID: k141_6722_37
Type: CAZyme
Location: 36016 - 37503 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_6722_36 vegetarian > vegan 2.69983 0.02517

🧭 Explore Read Mapping of CGC

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