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Cluster: CGMR046257_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_3676 k141_3676_26 31179 33086 + 4.A.2.1.3
CAZyme k141_3676 k141_3676_27 33110 35740 + GH38
TC k141_3676 k141_3676_28 36416 37984 + 3.D.4.3.2
TC k141_3676 k141_3676_29 38000 39139 + 3.D.4.3.2
TC k141_3676 k141_3676_30 39154 39267 + 9.B.85.1.1
TC k141_3676 k141_3676_31 39267 39557 + 8.A.79.1.1
pfam k141_3676 k141_3676_32 39706 40110 + 4HBT | 4HBT_2
TC k141_3676 k141_3676_33 40107 40799 + 1.A.30.2.2
TC k141_3676 k141_3676_34 40803 41231 + 1.A.30.2.2
TC k141_3676 k141_3676_35 41260 42417 + 2.C.1.2.1
TC k141_3676 k141_3676_36 42552 43844 + 2.C.1.2.1
TC k141_3676 k141_3676_37 43880 44401 + 2.C.1.2.1
TC k141_3676 k141_3676_38 44411 45205 + 2.C.1.2.1
pfam k141_3676 k141_3676_39 45982 46323 + FlxA
TF k141_3676 k141_3676_40 46314 47246 - HTH_1
TC k141_3676 k141_3676_41 47336 48331 + 2.A.28.3.4
Gene ID: k141_3676_26
Type: TC
Location: 31179 - 33086 (+)
Gene ID: k141_3676_27
Type: CAZyme
Location: 33110 - 35740 (+)
Gene ID: k141_3676_28
Type: TC
Location: 36416 - 37984 (+)
Gene ID: k141_3676_29
Type: TC
Location: 38000 - 39139 (+)
Gene ID: k141_3676_30
Type: TC
Location: 39154 - 39267 (+)
Gene ID: k141_3676_31
Type: TC
Location: 39267 - 39557 (+)
Gene ID: k141_3676_32
Type: pfam
Location: 39706 - 40110 (+)
Gene ID: k141_3676_33
Type: TC
Location: 40107 - 40799 (+)
Gene ID: k141_3676_34
Type: TC
Location: 40803 - 41231 (+)
Gene ID: k141_3676_35
Type: TC
Location: 41260 - 42417 (+)
Gene ID: k141_3676_36
Type: TC
Location: 42552 - 43844 (+)
Gene ID: k141_3676_37
Type: TC
Location: 43880 - 44401 (+)
Gene ID: k141_3676_38
Type: TC
Location: 44411 - 45205 (+)
Gene ID: k141_3676_39
Type: pfam
Location: 45982 - 46323 (+)
Gene ID: k141_3676_40
Type: TF
Location: 46314 - 47246 (-)
Gene ID: k141_3676_41
Type: TC
Location: 47336 - 48331 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_3676_26 vegetarian > omnivore 1.76351 0.04036
k141_3676_26 vegetarian > vegan 2.20087 0.02517
k141_3676_27 vegetarian > omnivore 1.75239 0.04459
k141_3676_27 vegetarian > vegan 1.05220 0.04707

🧭 Explore Read Mapping of CGC

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