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Cluster: CGMR046257_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2844 k141_2844_230 235609 236013 - 2.A.7.22.1
TC k141_2844 k141_2844_231 236010 236336 - 2.A.7.22.2
CAZyme k141_2844 k141_2844_232 236333 237988 - GT83
pfam k141_2844 k141_2844_233 237985 238887 - Polysacc_deac_1
pfam k141_2844 k141_2844_234 238884 240866 - Formyl_trans_N | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
CAZyme k141_2844 k141_2844_235 240863 241846 - GT2
Gene ID: k141_2844_230
Type: TC
Location: 235609 - 236013 (-)
Gene ID: k141_2844_231
Type: TC
Location: 236010 - 236336 (-)
Gene ID: k141_2844_232
Type: CAZyme
Location: 236333 - 237988 (-)
Gene ID: k141_2844_233
Type: pfam
Location: 237985 - 238887 (-)
Gene ID: k141_2844_234
Type: pfam
Location: 238884 - 240866 (-)
Gene ID: k141_2844_235
Type: CAZyme
Location: 240863 - 241846 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_2844_235 vegan > omnivore 1.49017 0.04296

🧭 Explore Read Mapping of CGC

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