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Cluster: CGMR046257_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2844 k141_2844_160 166056 166862 + 3.A.1.24.5
TC k141_2844 k141_2844_161 166855 167643 + 3.A.1.24.1
TC k141_2844 k141_2844_162 167631 168299 + 3.A.1.24.5
pfam k141_2844 k141_2844_163 168362 168592 + Fer4_19
pfam k141_2844 k141_2844_164 168603 168875 + Acetyltransf_1 | Acetyltransf_CG
TC k141_2844 k141_2844_165 168911 170140 - 2.A.42.2.5
TC k141_2844 k141_2844_166 170260 170721 - 2.A.117.1.3
TF k141_2844 k141_2844_167 170823 171689 + HTH_1
pfam k141_2844 k141_2844_168 171783 172961 + Thiolase_N | ketoacyl-synt | Thiolase_C
TC k141_2844 k141_2844_169 173280 173963 + 1.B.35.1.5
CAZyme k141_2844 k141_2844_170 174149 175324 - PL22 | PL22
pfam k141_2844 k141_2844_171 175622 176458 + KduI
pfam k141_2844 k141_2844_172 176522 177283 + adh_short | KR | adh_short_C2
TC k141_2844 k141_2844_173 177597 179012 + 2.A.1.1.2
TF k141_2844 k141_2844_174 179013 180008 - LacI
TC k141_2844 k141_2844_175 180230 181471 + 2.A.1.5.2
CAZyme k141_2844 k141_2844_176 181491 182924 + GH32
TC k141_2844 k141_2844_177 183010 184296 - 3.A.1.1.11
TC k141_2844 k141_2844_178 184310 185437 - 3.A.1.1.11
TC k141_2844 k141_2844_179 185450 186352 - 3.A.1.1.11
TC k141_2844 k141_2844_180 186345 187235 - 3.A.1.1.11
Gene ID: k141_2844_160
Type: TC
Location: 166056 - 166862 (+)
Gene ID: k141_2844_161
Type: TC
Location: 166855 - 167643 (+)
Gene ID: k141_2844_162
Type: TC
Location: 167631 - 168299 (+)
Gene ID: k141_2844_163
Type: pfam
Location: 168362 - 168592 (+)
Gene ID: k141_2844_164
Type: pfam
Location: 168603 - 168875 (+)
Gene ID: k141_2844_165
Type: TC
Location: 168911 - 170140 (-)
Gene ID: k141_2844_166
Type: TC
Location: 170260 - 170721 (-)
Gene ID: k141_2844_167
Type: TF
Location: 170823 - 171689 (+)
Gene ID: k141_2844_168
Type: pfam
Location: 171783 - 172961 (+)
Gene ID: k141_2844_169
Type: TC
Location: 173280 - 173963 (+)
Gene ID: k141_2844_170
Type: CAZyme
Location: 174149 - 175324 (-)
Gene ID: k141_2844_171
Type: pfam
Location: 175622 - 176458 (+)
Gene ID: k141_2844_172
Type: pfam
Location: 176522 - 177283 (+)
Gene ID: k141_2844_173
Type: TC
Location: 177597 - 179012 (+)
Gene ID: k141_2844_174
Type: TF
Location: 179013 - 180008 (-)
Gene ID: k141_2844_175
Type: TC
Location: 180230 - 181471 (+)
Gene ID: k141_2844_176
Type: CAZyme
Location: 181491 - 182924 (+)
Gene ID: k141_2844_177
Type: TC
Location: 183010 - 184296 (-)
Gene ID: k141_2844_178
Type: TC
Location: 184310 - 185437 (-)
Gene ID: k141_2844_179
Type: TC
Location: 185450 - 186352 (-)
Gene ID: k141_2844_180
Type: TC
Location: 186345 - 187235 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_2844_163 vegetarian > vegan 2.23174 0.04707
k141_2844_166 vegetarian > vegan 1.37633 0.04215
k141_2844_167 vegetarian > vegan 1.33794 0.04707
k141_2844_169 vegetarian > vegan 1.13423 0.04707
k141_2844_170 vegetarian > omnivore 2.28819 0.04036
k141_2844_170 vegetarian > vegan 1.46230 0.04707

🧭 Explore Read Mapping of CGC

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