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Cluster: CGMR046257_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_2001 k141_2001_18 15394 17037 - GH13_29
TC k141_2001 k141_2001_19 17089 18507 - 4.A.1.2.4
TF k141_2001 k141_2001_20 18636 19583 - LacI
TC k141_2001 k141_2001_21 19973 22681 + 3.A.3.4.1
Gene ID: k141_2001_18
Type: CAZyme
Location: 15394 - 17037 (-)
Gene ID: k141_2001_19
Type: TC
Location: 17089 - 18507 (-)
Gene ID: k141_2001_20
Type: TF
Location: 18636 - 19583 (-)
Gene ID: k141_2001_21
Type: TC
Location: 19973 - 22681 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_2001_18 vegetarian > omnivore 1.00990 0.04670

🧭 Explore Read Mapping of CGC

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