dbCAN Logo

Cluster: CGMR046257_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2761 k141_2761_19 16562 16855 - 3.A.1.27.3
TC k141_2761 k141_2761_20 16855 17490 - 3.A.1.27.3
TC k141_2761 k141_2761_21 17509 18057 - 3.A.1.27.3
TC k141_2761 k141_2761_22 18062 18844 - 3.A.1.27.3
TC k141_2761 k141_2761_23 18852 19664 - 3.A.1.27.3
TC k141_2761 k141_2761_24 19893 20870 + 2.A.19.5.1
STP k141_2761 k141_2761_25 20884 21870 + CBS | CBS | SIS
pfam k141_2761 k141_2761_26 21885 22451 + Hydrolase_3
TC k141_2761 k141_2761_27 22448 23023 + 1.B.42.1.2
TC k141_2761 k141_2761_28 22992 23546 + 1.B.42.1.2
TC k141_2761 k141_2761_29 23553 24278 + 1.B.42.1.2
pfam k141_2761 k141_2761_30 24326 25759 + Sigma54_AID | Sigma54_DBD | Sigma54_CBD
pfam k141_2761 k141_2761_31 25782 26069 + Ribosomal_S30AE
TC k141_2761 k141_2761_32 26152 26643 + 4.A.2.1.4
pfam k141_2761 k141_2761_33 26689 27543 + RapZ-like_N | PapZ_C
TC k141_2761 k141_2761_34 27540 27812 + 8.A.8.1.5
CAZyme k141_2761 k141_2761_35 27852 28577 - GT51
peptidase k141_2761 k141_2761_36 28574 29227 - C56.975
STP k141_2761 k141_2761_37 29459 31792 - HATPase_c | HisKA | PAS | Response_reg
TC k141_2761 k141_2761_38 31928 33010 - 1.B.42.1.2
TC k141_2761 k141_2761_39 33010 34110 - 1.B.42.1.2
Gene ID: k141_2761_19
Type: TC
Location: 16562 - 16855 (-)
Gene ID: k141_2761_20
Type: TC
Location: 16855 - 17490 (-)
Gene ID: k141_2761_21
Type: TC
Location: 17509 - 18057 (-)
Gene ID: k141_2761_22
Type: TC
Location: 18062 - 18844 (-)
Gene ID: k141_2761_23
Type: TC
Location: 18852 - 19664 (-)
Gene ID: k141_2761_24
Type: TC
Location: 19893 - 20870 (+)
Gene ID: k141_2761_25
Type: STP
Location: 20884 - 21870 (+)
Gene ID: k141_2761_26
Type: pfam
Location: 21885 - 22451 (+)
Gene ID: k141_2761_27
Type: TC
Location: 22448 - 23023 (+)
Gene ID: k141_2761_28
Type: TC
Location: 22992 - 23546 (+)
Gene ID: k141_2761_29
Type: TC
Location: 23553 - 24278 (+)
Gene ID: k141_2761_30
Type: pfam
Location: 24326 - 25759 (+)
Gene ID: k141_2761_31
Type: pfam
Location: 25782 - 26069 (+)
Gene ID: k141_2761_32
Type: TC
Location: 26152 - 26643 (+)
Gene ID: k141_2761_33
Type: pfam
Location: 26689 - 27543 (+)
Gene ID: k141_2761_34
Type: TC
Location: 27540 - 27812 (+)
Gene ID: k141_2761_35
Type: CAZyme
Location: 27852 - 28577 (-)
Gene ID: k141_2761_36
Type: peptidase
Location: 28574 - 29227 (-)
Gene ID: k141_2761_37
Type: STP
Location: 29459 - 31792 (-)
Gene ID: k141_2761_38
Type: TC
Location: 31928 - 33010 (-)
Gene ID: k141_2761_39
Type: TC
Location: 33010 - 34110 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List