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Cluster: CGMR046257_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1649 k141_1649_22 19891 20913 - 2.A.52.1.1
pfam k141_1649 k141_1649_23 20915 23131 - Acylphosphatase | Sua5_yciO_yrdC | zf-HYPF | zf-HYPF | HypF_C | HypF_C_2
TC k141_1649 k141_1649_24 23138 23683 - 5.A.3.11.1
TF k141_1649 k141_1649_25 23818 24831 - LacI
TC k141_1649 k141_1649_26 25045 26496 + 4.A.1.2.3
CAZyme k141_1649 k141_1649_27 26515 27939 + GH1
peptidase k141_1649 k141_1649_28 28021 28476 - A31.003
pfam k141_1649 k141_1649_29 28469 28879 - HycH
TC k141_1649 k141_1649_30 28876 29643 - 3.D.1.9.2
TC k141_1649 k141_1649_31 29643 30185 - 3.D.1.9.2
TC k141_1649 k141_1649_32 30195 31904 - 3.D.1.9.2
TC k141_1649 k141_1649_33 31920 32843 - 3.D.1.9.2
TC k141_1649 k141_1649_34 32845 34659 - 3.D.1.9.2
TC k141_1649 k141_1649_35 34656 35264 - 3.D.1.9.2
Gene ID: k141_1649_22
Type: TC
Location: 19891 - 20913 (-)
Gene ID: k141_1649_23
Type: pfam
Location: 20915 - 23131 (-)
Gene ID: k141_1649_24
Type: TC
Location: 23138 - 23683 (-)
Gene ID: k141_1649_25
Type: TF
Location: 23818 - 24831 (-)
Gene ID: k141_1649_26
Type: TC
Location: 25045 - 26496 (+)
Gene ID: k141_1649_27
Type: CAZyme
Location: 26515 - 27939 (+)
Gene ID: k141_1649_28
Type: peptidase
Location: 28021 - 28476 (-)
Gene ID: k141_1649_29
Type: pfam
Location: 28469 - 28879 (-)
Gene ID: k141_1649_30
Type: TC
Location: 28876 - 29643 (-)
Gene ID: k141_1649_31
Type: TC
Location: 29643 - 30185 (-)
Gene ID: k141_1649_32
Type: TC
Location: 30195 - 31904 (-)
Gene ID: k141_1649_33
Type: TC
Location: 31920 - 32843 (-)
Gene ID: k141_1649_34
Type: TC
Location: 32845 - 34659 (-)
Gene ID: k141_1649_35
Type: TC
Location: 34656 - 35264 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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