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Cluster: CGMR046257_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6122 k141_6122_11 10370 11842 - 3.A.1.26.3
TF k141_6122 k141_6122_12 11910 12698 - HTH_1
TC k141_6122 k141_6122_13 12826 12975 + 2.A.6.2.49
TC k141_6122 k141_6122_14 13153 13926 + 3.A.1.8.1
TC k141_6122 k141_6122_15 13926 14615 + 3.A.1.8.1
TC k141_6122 k141_6122_16 14618 15676 + 3.A.1.8.1
pfam k141_6122 k141_6122_17 15677 16495 - Hydrolase | S6PP | S6PP | Hydrolase_3
pfam k141_6122 k141_6122_18 16636 17631 + Lactonase
CAZyme k141_6122 k141_6122_19 17719 19002 - CE8
Gene ID: k141_6122_11
Type: TC
Location: 10370 - 11842 (-)
Gene ID: k141_6122_12
Type: TF
Location: 11910 - 12698 (-)
Gene ID: k141_6122_13
Type: TC
Location: 12826 - 12975 (+)
Gene ID: k141_6122_14
Type: TC
Location: 13153 - 13926 (+)
Gene ID: k141_6122_15
Type: TC
Location: 13926 - 14615 (+)
Gene ID: k141_6122_16
Type: TC
Location: 14618 - 15676 (+)
Gene ID: k141_6122_17
Type: pfam
Location: 15677 - 16495 (-)
Gene ID: k141_6122_18
Type: pfam
Location: 16636 - 17631 (+)
Gene ID: k141_6122_19
Type: CAZyme
Location: 17719 - 19002 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_6122_11 vegan > omnivore 1.21404 0.01920
k141_6122_13 vegetarian > vegan 1.29246 0.04707
k141_6122_15 vegetarian > vegan 1.48643 0.04707

🧭 Explore Read Mapping of CGC

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