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Cluster: CGMR046257_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2548 k141_2548_26 26788 28305 + 1.B.3.1.2
TC k141_2548 k141_2548_27 28373 29743 + 4.A.1.2.1
CAZyme k141_2548 k141_2548_28 29743 31149 + GH32
TF k141_2548 k141_2548_29 31178 32194 + LacI
TC k141_2548 k141_2548_30 32284 33834 + 1.B.52.2.2
Gene ID: k141_2548_26
Type: TC
Location: 26788 - 28305 (+)
Gene ID: k141_2548_27
Type: TC
Location: 28373 - 29743 (+)
Gene ID: k141_2548_28
Type: CAZyme
Location: 29743 - 31149 (+)
Gene ID: k141_2548_29
Type: TF
Location: 31178 - 32194 (+)
Gene ID: k141_2548_30
Type: TC
Location: 32284 - 33834 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_2548_26 vegetarian > vegan 1.66620 0.04272

🧭 Explore Read Mapping of CGC

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