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Cluster: CGMR046257_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_5600 k141_5600_33 36999 38186 - 2.A.1.2.26
TF k141_5600 k141_5600_34 38302 39258 + HTH_AraC | HTH_AraC
TC k141_5600 k141_5600_35 39277 40617 - 1.B.15.1.1
CAZyme k141_5600 k141_5600_36 41038 42723 + GH37
TC k141_5600 k141_5600_37 42804 44906 - 1.B.14.1.2
TC k141_5600 k141_5600_38 45022 45276 - 1.E.43.1.1
pfam k141_5600 k141_5600_39 45484 46215 + PilZ | PilZN
CAZyme k141_5600 k141_5600_40 46251 46772 - GH23
peptidase k141_5600 k141_5600_41 46970 47884 + S66.002
TC k141_5600 k141_5600_42 47982 49715 + 2.A.36.6.11
Gene ID: k141_5600_33
Type: TC
Location: 36999 - 38186 (-)
Gene ID: k141_5600_34
Type: TF
Location: 38302 - 39258 (+)
Gene ID: k141_5600_35
Type: TC
Location: 39277 - 40617 (-)
Gene ID: k141_5600_36
Type: CAZyme
Location: 41038 - 42723 (+)
Gene ID: k141_5600_37
Type: TC
Location: 42804 - 44906 (-)
Gene ID: k141_5600_38
Type: TC
Location: 45022 - 45276 (-)
Gene ID: k141_5600_39
Type: pfam
Location: 45484 - 46215 (+)
Gene ID: k141_5600_40
Type: CAZyme
Location: 46251 - 46772 (-)
Gene ID: k141_5600_41
Type: peptidase
Location: 46970 - 47884 (+)
Gene ID: k141_5600_42
Type: TC
Location: 47982 - 49715 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_5600_39 vegetarian > vegan 2.97708 0.02517
k141_5600_40 vegetarian > vegan 1.24551 0.04707
k141_5600_41 vegetarian > vegan 2.58467 0.04707

🧭 Explore Read Mapping of CGC

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