Cluster: CGMR045986_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045986
- CGC Family ID: CGCFAM_04338
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_213763 | k141_213763_41 | 44853 | 45572 | + | 1.A.8.2.7 |
| peptidase | k141_213763 | k141_213763_42 | 45633 | 47441 | - | M03.007 |
| TF | k141_213763 | k141_213763_43 | 47519 | 48229 | - | CoiA |
| TC | k141_213763 | k141_213763_44 | 48348 | 49709 | - | 4.A.3.2.2 |
| CAZyme | k141_213763 | k141_213763_45 | 49784 | 51235 | - | GH1 |
| TC | k141_213763 | k141_213763_46 | 51235 | 51453 | - | 4.A.3.2.4 |
Gene ID: k141_213763_41
Type: TC
Location: 44853 - 45572 (+)
Type: TC
Location: 44853 - 45572 (+)
Gene ID: k141_213763_42
Type: peptidase
Location: 45633 - 47441 (-)
Type: peptidase
Location: 45633 - 47441 (-)
Gene ID: k141_213763_43
Type: TF
Location: 47519 - 48229 (-)
Type: TF
Location: 47519 - 48229 (-)
Gene ID: k141_213763_44
Type: TC
Location: 48348 - 49709 (-)
Type: TC
Location: 48348 - 49709 (-)
Gene ID: k141_213763_45
Type: CAZyme
Location: 49784 - 51235 (-)
Type: CAZyme
Location: 49784 - 51235 (-)
Gene ID: k141_213763_46
Type: TC
Location: 51235 - 51453 (-)
Type: TC
Location: 51235 - 51453 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Weissella
Species
Weissella confusa_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.